RNA–Protein interactions for RNA: ENST00000447223.5

ACAA1-208, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-208ENST00000447223 PNMA8AQ86V59 439 aaPredicted RBP22.03■■□□□ 1.12
ACAA1-208ENST00000447223 CCDC93Q567U6 631 aa22.02■■□□□ 1.12
ACAA1-208ENST00000447223 PANK3Q9H999 370 aa22.02■■□□□ 1.12
ACAA1-208ENST00000447223 PAXIP1Q6ZW49 1069 aaPredicted RBP22.01■■□□□ 1.11
ACAA1-208ENST00000447223 ZNF541Q9H0D2 1346 aa22.01■■□□□ 1.11
ACAA1-208ENST00000447223 FER1L6Q2WGJ9 1857 aa22■■□□□ 1.11
ACAA1-208ENST00000447223 TEX13AQ9BXU3 409 aaPredicted RBP22■■□□□ 1.11
ACAA1-208ENST00000447223 ZNF277Q9NRM2 450 aaPredicted RBP22■■□□□ 1.11
ACAA1-208ENST00000447223 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
ACAA1-208ENST00000447223 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
ACAA1-208ENST00000447223 RGS19P49795 217 aa21.99■■□□□ 1.11
ACAA1-208ENST00000447223 FKBP4Q02790 459 aaKnown RBP eCLIP21.99■■□□□ 1.11
ACAA1-208ENST00000447223 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
ACAA1-208ENST00000447223 HMOX1P09601 288 aa21.98■■□□□ 1.11
ACAA1-208ENST00000447223 GRM1Q13255 1194 aa21.98■■□□□ 1.11
ACAA1-208ENST00000447223 RNF123Q5XPI4 1314 aa21.98■■□□□ 1.11
ACAA1-208ENST00000447223 MRC1P22897 1456 aa21.97■■□□□ 1.11
ACAA1-208ENST00000447223 IL6STP40189 918 aaPredicted RBP21.97■■□□□ 1.11
ACAA1-208ENST00000447223 ECE1P42892 770 aa21.97■■□□□ 1.11
ACAA1-208ENST00000447223 MTHFSDQ2M296 383 aaKnown RBP21.96■■□□□ 1.11
ACAA1-208ENST00000447223 C7orf43Q8WVR3 580 aa21.96■■□□□ 1.11
ACAA1-208ENST00000447223 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
ACAA1-208ENST00000447223 ANKRD31Q8N7Z5 1873 aa21.96■■□□□ 1.11
ACAA1-208ENST00000447223 SCN4AP35499 1836 aa21.95■■□□□ 1.1
ACAA1-208ENST00000447223 NPR1P16066 1061 aa21.95■■□□□ 1.1
ACAA1-208ENST00000447223 NBPF5PQ86XG9 351 aaPredicted RBP21.95■■□□□ 1.1
ACAA1-208ENST00000447223 RTKN2Q8IZC4 609 aa21.95■■□□□ 1.1
ACAA1-208ENST00000447223 CAPNS2Q96L46 248 aa21.95■■□□□ 1.1
ACAA1-208ENST00000447223 GPR101Q96P66 508 aaPredicted RBP21.95■■□□□ 1.1
ACAA1-208ENST00000447223 DDX21Q9NR30 783 aaKnown RBP eCLIP21.95■■□□□ 1.1
ACAA1-208ENST00000447223 CAMTA2O94983 1202 aa21.94■■□□□ 1.1
ACAA1-208ENST00000447223 SLX4Q8IY92 1834 aa21.94■■□□□ 1.1
ACAA1-208ENST00000447223 A1BGP04217 495 aa21.93■■□□□ 1.1
ACAA1-208ENST00000447223 COL11A2P13942 1736 aaPredicted RBP21.93■■□□□ 1.1
ACAA1-208ENST00000447223 TEFQ10587 303 aa21.93■■□□□ 1.1
ACAA1-208ENST00000447223 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
ACAA1-208ENST00000447223 GPC2Q8N158 579 aa21.93■■□□□ 1.1
ACAA1-208ENST00000447223 HEG1Q9ULI3 1381 aa21.93■■□□□ 1.1
ACAA1-208ENST00000447223 FZD9O00144 591 aa21.92■■□□□ 1.1
ACAA1-208ENST00000447223 IARSP41252 1262 aaKnown RBP21.92■■□□□ 1.1
ACAA1-208ENST00000447223 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
ACAA1-208ENST00000447223 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
ACAA1-208ENST00000447223 SYNE4Q8N205 404 aa21.92■■□□□ 1.1
ACAA1-208ENST00000447223 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
ACAA1-208ENST00000447223 LMOD1P29536 600 aaPredicted RBP21.91■■□□□ 1.1
ACAA1-208ENST00000447223 CYP4F22Q6NT55 531 aa21.91■■□□□ 1.1
ACAA1-208ENST00000447223 OLFM4Q6UX06 510 aa21.91■■□□□ 1.1
ACAA1-208ENST00000447223 TSKSQ9UJT2 592 aa21.91■■□□□ 1.1
ACAA1-208ENST00000447223 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
ACAA1-208ENST00000447223 GJA3Q9Y6H8 435 aa21.9■■□□□ 1.1
ACAA1-208ENST00000447223 EIF6P56537 245 aaKnown RBP21.89■■□□□ 1.09
ACAA1-208ENST00000447223 FMNL2Q96PY5 1086 aa21.89■■□□□ 1.09
ACAA1-208ENST00000447223 FMR1Q06787 632 aaKnown RBP eCLIP21.88■■□□□ 1.09
ACAA1-208ENST00000447223 TPTE2Q6XPS3 522 aa21.88■■□□□ 1.09
ACAA1-208ENST00000447223 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
ACAA1-208ENST00000447223 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
ACAA1-208ENST00000447223 SCN7AQ01118 1682 aa21.86■■□□□ 1.09
ACAA1-208ENST00000447223 MAP2K2P36507 400 aa21.86■■□□□ 1.09
ACAA1-208ENST00000447223 CLEC4GQ6UXB4 293 aa21.86■■□□□ 1.09
ACAA1-208ENST00000447223 MCOLN1Q9GZU1 580 aa21.86■■□□□ 1.09
ACAA1-208ENST00000447223 KLRG2A4D1S0 409 aaPredicted RBP21.85■■□□□ 1.09
ACAA1-208ENST00000447223 FAM177BA6PVY3 158 aa21.85■■□□□ 1.09
ACAA1-208ENST00000447223 ADAMTSL1Q8N6G6 1762 aa21.84■■□□□ 1.09
ACAA1-208ENST00000447223 CA12O43570 354 aa21.84■■□□□ 1.09
ACAA1-208ENST00000447223 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
ACAA1-208ENST00000447223 AOC2O75106 756 aa21.84■■□□□ 1.09
ACAA1-208ENST00000447223 GTF2E1P29083 439 aaPredicted RBP21.84■■□□□ 1.09
ACAA1-208ENST00000447223 IL17REQ8NFR9 667 aa21.84■■□□□ 1.09
ACAA1-208ENST00000447223 TLL2Q9Y6L7 1015 aa21.84■■□□□ 1.09
ACAA1-208ENST00000447223 GNAT3A8MTJ3 354 aa21.83■■□□□ 1.09
ACAA1-208ENST00000447223 TRAF5O00463 557 aa21.83■■□□□ 1.09
ACAA1-208ENST00000447223 EPS15P42566 896 aa21.83■■□□□ 1.09
ACAA1-208ENST00000447223 PIP4K2AP48426 406 aaPredicted RBP21.83■■□□□ 1.09
ACAA1-208ENST00000447223 CST9Q5W186 159 aa21.83■■□□□ 1.09
ACAA1-208ENST00000447223 NIP7Q9Y221 180 aaKnown RBP eCLIP21.83■■□□□ 1.09
ACAA1-208ENST00000447223 USP50Q70EL3 339 aaPredicted RBP21.82■■□□□ 1.08
ACAA1-208ENST00000447223 PSMD1Q99460 953 aa21.82■■□□□ 1.08
ACAA1-208ENST00000447223 CACNA1SQ13698 1873 aa21.81■■□□□ 1.08
ACAA1-208ENST00000447223 DGKZQ13574 1117 aa21.81■■□□□ 1.08
ACAA1-208ENST00000447223 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
ACAA1-208ENST00000447223 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
ACAA1-208ENST00000447223 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.08
ACAA1-208ENST00000447223 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
ACAA1-208ENST00000447223 ARFGEF2Q9Y6D5 1785 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 KCNQ3O43525 872 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 SCNN1DP51172 638 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 CC2D2BQ6DHV5 1058 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 LARGE2Q8N3Y3 721 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
ACAA1-208ENST00000447223 CELF2O95319 508 aaKnown RBP21.77■■□□□ 1.08
ACAA1-208ENST00000447223 HSPA5P11021 654 aaKnown RBP21.77■■□□□ 1.08
ACAA1-208ENST00000447223 U2SURPO15042 1029 aaKnown RBP21.76■■□□□ 1.07
ACAA1-208ENST00000447223 SAPCD2Q86UD0 394 aa21.76■■□□□ 1.07
ACAA1-208ENST00000447223 BRPF1P55201 1214 aaPredicted RBP21.75■■□□□ 1.07
ACAA1-208ENST00000447223 NIM1KQ8IY84 436 aa21.75■■□□□ 1.07
ACAA1-208ENST00000447223 THSD7BQ9C0I4 1608 aa21.75■■□□□ 1.07
ACAA1-208ENST00000447223 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
ACAA1-208ENST00000447223 GRIPAP1Q4V328 841 aa21.74■■□□□ 1.07
ACAA1-208ENST00000447223 AMER1Q5JTC6 1135 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms