RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NUP88Q99567 741 aaPredicted RBP9.08□□□□□ -0.96
SMG1-202ENST00000446231 KLHL10Q6JEL2 608 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 MBIPQ9NS73 344 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 CABP1Q9NZU7 370 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 MAATS1Q7Z4T9 603 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 CPSF2Q9P2I0 782 aaKnown RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 PUF60Q9UHX1 559 aaKnown RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 POLA1P09884 1462 aaPredicted RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 C8orf76Q96K31 380 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 ISM2Q6H9L7 571 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 ZSCAN16Q9H4T2 348 aaPredicted RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG1-202ENST00000446231 PER1O15534 1290 aaPredicted RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 NEUROD6Q96NK8 337 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 AOPEPQ8N6M6 819 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
SMG1-202ENST00000446231 FMNL3Q8IVF7 1028 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 ELP1O95163 1332 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 RAD50Q92878 1312 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 CCDC175P0C221 793 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 KIF1BPQ96EK5 621 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 GOLIM4O00461 696 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 RHOXF2BP0C7M4 288 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 RHOXF2Q9BQY4 288 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 TRIM22Q8IYM9 498 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
SMG1-202ENST00000446231 PRDM4Q9UKN5 801 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 CHAMP1Q96JM3 812 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 SYKP43405 635 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
SMG1-202ENST00000446231 ZMYM3Q14202 1370 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 MORC2Q9Y6X9 1032 aaPredicted RBP9.06□□□□□ -0.96
SMG1-202ENST00000446231 USP19O94966 1318 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 A6NNZ2 444 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 PKP1Q13835 747 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 SART3Q15020 963 aaKnown RBP9.06□□□□□ -0.96
SMG1-202ENST00000446231 TUBB8Q3ZCM7 444 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 ANKS4BQ8N8V4 417 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
SMG1-202ENST00000446231 AQRO60306 1485 aaKnown RBP eCLIP9.06□□□□□ -0.961e-6■■■■□ 20.3
SMG1-202ENST00000446231 SULT6B1Q6IMI4 303 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 PAFAH1B1P43034 410 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 MATR3P43243 847 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG1-202ENST00000446231 MCTP2Q6DN12 878 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 C9orf84Q5VXU9 1444 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 VPS53Q5VIR6 699 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 CARD6Q9BX69 1037 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 ECHDC1Q9NTX5 307 aa9.06□□□□□ -0.96
SMG1-202ENST00000446231 CCT2P78371 535 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 ANKRD18AQ8IVF6 992 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 HMG20BQ9P0W2 317 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 RRP15Q9Y3B9 282 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 PTPRKQ15262 1439 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 ALS2CR12Q96Q35 445 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 TESK2Q96S53 571 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 LZTFL1Q9NQ48 299 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 LRMPQ12912 555 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 HMGB1P09429 215 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 NCBP1Q09161 790 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 HSP90AB2PQ58FF8 381 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 KCNG4Q8TDN1 519 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 NGDNQ8NEJ9 315 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 ZEB2O60315 1214 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 PNMA6AP0CW24 399 aaPredicted RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 FAM160A1Q05DH4 1040 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 CHMLP26374 656 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 HYPKQ9NX55 129 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 ATAD2BQ9ULI0 1458 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 RPAINQ86UA6 219 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 ANKRD44Q8N8A2 993 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 PDE11AQ9HCR9 933 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 RIC3Q7Z5B4 369 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 N4BP3O15049 544 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 ARHGAP25P42331 645 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 TIAM1Q13009 1591 aa9.05□□□□□ -0.96
SMG1-202ENST00000446231 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
SMG1-202ENST00000446231 XBP1P17861 261 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 TEFQ10587 303 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 E2F4Q16254 413 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 EVI5LQ96CN4 794 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA6L10A0A0M3HER8 536 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 IBTKQ9P2D0 1353 aaPredicted RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA6CA6NDK9 693 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 ZBTB22O15209 634 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA6DP0CG33 693 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA6AQ9NYA3 693 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 456 ms