RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ZNF622Q969S3 477 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPRE-203ENST00000442830 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
PTPRE-203ENST00000442830 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
PTPRE-203ENST00000442830 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
PTPRE-203ENST00000442830 DNAJC5GQ8N7S2 189 aa18.35■□□□□ 0.53
PTPRE-203ENST00000442830 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
PTPRE-203ENST00000442830 NFKBIEO00221 500 aa18.34■□□□□ 0.53
PTPRE-203ENST00000442830 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
PTPRE-203ENST00000442830 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
PTPRE-203ENST00000442830 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
PTPRE-203ENST00000442830 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
PTPRE-203ENST00000442830 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
PTPRE-203ENST00000442830 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.52
PTPRE-203ENST00000442830 SRGNP10124 158 aa18.32■□□□□ 0.52
PTPRE-203ENST00000442830 TAF7Q15545 349 aaPredicted RBP18.32■□□□□ 0.52
PTPRE-203ENST00000442830 MCM10Q7L590 875 aa18.32■□□□□ 0.52
PTPRE-203ENST00000442830 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
PTPRE-203ENST00000442830 SLX4Q8IY92 1834 aa18.31■□□□□ 0.52
PTPRE-203ENST00000442830 KCNQ3O43525 872 aa18.31■□□□□ 0.52
PTPRE-203ENST00000442830 C21orf2O43822 256 aa18.31■□□□□ 0.52
PTPRE-203ENST00000442830 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
PTPRE-203ENST00000442830 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
PTPRE-203ENST00000442830 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
PTPRE-203ENST00000442830 PRPF40BQ6NWY9 871 aaKnown RBP18.3■□□□□ 0.52
PTPRE-203ENST00000442830 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
PTPRE-203ENST00000442830 NPR1P16066 1061 aa18.29■□□□□ 0.52
PTPRE-203ENST00000442830 PRELPP51888 382 aa18.28■□□□□ 0.52
PTPRE-203ENST00000442830 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
PTPRE-203ENST00000442830 NIP7Q9Y221 180 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTPRE-203ENST00000442830 SCN4AP35499 1836 aa18.28■□□□□ 0.52
PTPRE-203ENST00000442830 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
PTPRE-203ENST00000442830 KLRG2A4D1S0 409 aaPredicted RBP18.26■□□□□ 0.51
PTPRE-203ENST00000442830 NUP98P52948 1817 aa18.26■□□□□ 0.51
PTPRE-203ENST00000442830 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 IQCA1LA6NCM1 817 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 ALDH1B1P30837 517 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 CCDC24Q8N4L8 307 aa18.25■□□□□ 0.51
PTPRE-203ENST00000442830 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
PTPRE-203ENST00000442830 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
PTPRE-203ENST00000442830 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
PTPRE-203ENST00000442830 IBTKQ9P2D0 1353 aaPredicted RBP18.24■□□□□ 0.51
PTPRE-203ENST00000442830 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
PTPRE-203ENST00000442830 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
PTPRE-203ENST00000442830 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
PTPRE-203ENST00000442830 KIF6Q6ZMV9 814 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
PTPRE-203ENST00000442830 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
PTPRE-203ENST00000442830 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
PTPRE-203ENST00000442830 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-203ENST00000442830 PLEKHF1Q96S99 279 aa18.21■□□□□ 0.51
PTPRE-203ENST00000442830 MAP3K15Q6ZN16 1313 aa18.21■□□□□ 0.51
PTPRE-203ENST00000442830 POTECB2RU33 542 aa18.2■□□□□ 0.5
PTPRE-203ENST00000442830 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
PTPRE-203ENST00000442830 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
PTPRE-203ENST00000442830 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
PTPRE-203ENST00000442830 HTRA3P83110 453 aa18.19■□□□□ 0.5
PTPRE-203ENST00000442830 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
PTPRE-203ENST00000442830 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
PTPRE-203ENST00000442830 LDHDQ86WU2 507 aa18.18■□□□□ 0.5
PTPRE-203ENST00000442830 CREBZFQ9NS37 354 aa18.18■□□□□ 0.5
PTPRE-203ENST00000442830 PCNTO95613 3336 aa18.18■□□□□ 0.5
PTPRE-203ENST00000442830 DDNO94850 711 aaPredicted RBP18.17■□□□□ 0.5
PTPRE-203ENST00000442830 RALBP1Q15311 655 aa18.17■□□□□ 0.5
PTPRE-203ENST00000442830 HLFQ16534 295 aa18.17■□□□□ 0.5
PTPRE-203ENST00000442830 PSMD1Q99460 953 aa18.17■□□□□ 0.5
PTPRE-203ENST00000442830 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
PTPRE-203ENST00000442830 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
PTPRE-203ENST00000442830 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
PTPRE-203ENST00000442830 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
PTPRE-203ENST00000442830 IARSP41252 1262 aaKnown RBP18.15■□□□□ 0.5
PTPRE-203ENST00000442830 PPP1R42Q7Z4L9 355 aa18.15■□□□□ 0.5
PTPRE-203ENST00000442830 JDP2Q8WYK2 163 aa18.15■□□□□ 0.5
PTPRE-203ENST00000442830 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
PTPRE-203ENST00000442830 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
PTPRE-203ENST00000442830 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
PTPRE-203ENST00000442830 GIGYF2Q6Y7W6 1299 aaKnown RBP18.14■□□□□ 0.49
PTPRE-203ENST00000442830 PNMA8AQ86V59 439 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-203ENST00000442830 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-203ENST00000442830 TAF1DQ9H5J8 278 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-203ENST00000442830 ZNF277Q9NRM2 450 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-203ENST00000442830 HACL1Q9UJ83 578 aa18.14■□□□□ 0.49
PTPRE-203ENST00000442830 HOXA10P31260 410 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-203ENST00000442830 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
PTPRE-203ENST00000442830 RBM17Q96I25 401 aaKnown RBP18.13■□□□□ 0.49
PTPRE-203ENST00000442830 ANKRD36CQ5JPF3 1778 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 FZD9O00144 591 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 MYL6BP14649 208 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 GPC2Q8N158 579 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 SYNE4Q8N205 404 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
PTPRE-203ENST00000442830 EIF6P56537 245 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms