RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 GOLGB1Q14789 3259 aaKnown RBP17.9■□□□□ 0.46
LTBR-202ENST00000440421 ANXA1P04083 346 aa17.9■□□□□ 0.46
LTBR-202ENST00000440421 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
LTBR-202ENST00000440421 C2CD5Q86YS7 1000 aa17.9■□□□□ 0.46
LTBR-202ENST00000440421 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
LTBR-202ENST00000440421 ZNF784Q8NCA9 323 aaPredicted RBP17.9■□□□□ 0.46
LTBR-202ENST00000440421 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
LTBR-202ENST00000440421 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
LTBR-202ENST00000440421 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
LTBR-202ENST00000440421 PDIA6Q15084 440 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 PROSER3Q2NL68 480 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 ARHGAP27Q6ZUM4 889 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
LTBR-202ENST00000440421 ZBTB3Q9H5J0 574 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 MAP3K15Q6ZN16 1313 aa17.89■□□□□ 0.45
LTBR-202ENST00000440421 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 UTRNP46939 3433 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 H0YIN7 160 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 GNAI1P63096 354 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 ST5P78524 1137 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
LTBR-202ENST00000440421 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 RGL2O15211 777 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 ZNF853P0CG23 659 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 PDE6BP35913 854 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
LTBR-202ENST00000440421 NUP98P52948 1817 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 FAM9BQ8IZU0 186 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
LTBR-202ENST00000440421 GPTP24298 496 aa17.85■□□□□ 0.45
LTBR-202ENST00000440421 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
LTBR-202ENST00000440421 ZNF622Q969S3 477 aaKnown RBP eCLIP17.85■□□□□ 0.45
LTBR-202ENST00000440421 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
LTBR-202ENST00000440421 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
LTBR-202ENST00000440421 COL11A2P13942 1736 aaPredicted RBP17.84■□□□□ 0.45
LTBR-202ENST00000440421 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
LTBR-202ENST00000440421 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
LTBR-202ENST00000440421 COPS6Q7L5N1 327 aa17.84■□□□□ 0.45
LTBR-202ENST00000440421 TTLL6Q8N841 843 aa17.84■□□□□ 0.45
LTBR-202ENST00000440421 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
LTBR-202ENST00000440421 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
LTBR-202ENST00000440421 HOXB7P09629 217 aa17.83■□□□□ 0.44
LTBR-202ENST00000440421 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
LTBR-202ENST00000440421 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
LTBR-202ENST00000440421 WWC1Q8IX03 1113 aa17.83■□□□□ 0.44
LTBR-202ENST00000440421 ATP10DQ9P241 1426 aa17.82■□□□□ 0.44
LTBR-202ENST00000440421 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
LTBR-202ENST00000440421 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
LTBR-202ENST00000440421 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
LTBR-202ENST00000440421 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
LTBR-202ENST00000440421 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
LTBR-202ENST00000440421 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
LTBR-202ENST00000440421 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
LTBR-202ENST00000440421 SRGNP10124 158 aa17.8■□□□□ 0.44
LTBR-202ENST00000440421 SUSD4Q5VX71 490 aa17.8■□□□□ 0.44
LTBR-202ENST00000440421 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
LTBR-202ENST00000440421 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
LTBR-202ENST00000440421 NYXQ9GZU5 481 aa17.8■□□□□ 0.44
LTBR-202ENST00000440421 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
LTBR-202ENST00000440421 ADCY9O60503 1353 aa17.79■□□□□ 0.44
LTBR-202ENST00000440421 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
LTBR-202ENST00000440421 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
LTBR-202ENST00000440421 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
LTBR-202ENST00000440421 RASSF7Q02833 373 aa17.78■□□□□ 0.44
LTBR-202ENST00000440421 C9orf131Q5VYM1 1079 aa17.78■□□□□ 0.44
LTBR-202ENST00000440421 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
LTBR-202ENST00000440421 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
LTBR-202ENST00000440421 C21orf2O43822 256 aa17.77■□□□□ 0.44
LTBR-202ENST00000440421 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
LTBR-202ENST00000440421 CNKSR1Q969H4 720 aa17.77■□□□□ 0.44
LTBR-202ENST00000440421 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
LTBR-202ENST00000440421 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.43
LTBR-202ENST00000440421 ANKRD36CQ5JPF3 1778 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 NTSR2O95665 410 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 NPR1P16066 1061 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
LTBR-202ENST00000440421 PARP10Q53GL7 1025 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
LTBR-202ENST00000440421 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 ZNF428Q96B54 188 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
LTBR-202ENST00000440421 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
LTBR-202ENST00000440421 IL16Q14005 1332 aa17.75■□□□□ 0.43
LTBR-202ENST00000440421 SLX4Q8IY92 1834 aa17.75■□□□□ 0.43
LTBR-202ENST00000440421 KLRG2A4D1S0 409 aaPredicted RBP17.75■□□□□ 0.43
LTBR-202ENST00000440421 TCIRG1Q13488 830 aa17.75■□□□□ 0.43
LTBR-202ENST00000440421 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
LTBR-202ENST00000440421 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
LTBR-202ENST00000440421 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
LTBR-202ENST00000440421 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
LTBR-202ENST00000440421 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
LTBR-202ENST00000440421 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
LTBR-202ENST00000440421 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
LTBR-202ENST00000440421 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms