RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 CLEC4GQ6UXB4 293 aa15.74■□□□□ 0.11
PDGFB-203ENST00000440375 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
PDGFB-203ENST00000440375 ZNF622Q969S3 477 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDGFB-203ENST00000440375 NPHP1O15259 732 aa15.73■□□□□ 0.11
PDGFB-203ENST00000440375 ST5P78524 1137 aa15.73■□□□□ 0.11
PDGFB-203ENST00000440375 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-203ENST00000440375 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-203ENST00000440375 TSPYL4Q9UJ04 414 aa15.73■□□□□ 0.11
PDGFB-203ENST00000440375 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDGFB-203ENST00000440375 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
PDGFB-203ENST00000440375 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
PDGFB-203ENST00000440375 MYL6BP14649 208 aa15.72■□□□□ 0.11
PDGFB-203ENST00000440375 TTLL7Q6ZT98 887 aa15.72■□□□□ 0.11
PDGFB-203ENST00000440375 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-203ENST00000440375 TNRC6CQ9HCJ0 1690 aaKnown RBP15.71■□□□□ 0.11
PDGFB-203ENST00000440375 C21orf2O43822 256 aa15.71■□□□□ 0.11
PDGFB-203ENST00000440375 SRGNP10124 158 aa15.71■□□□□ 0.11
PDGFB-203ENST00000440375 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
PDGFB-203ENST00000440375 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.1
PDGFB-203ENST00000440375 RGL2O15211 777 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 LMNB1P20700 586 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDGFB-203ENST00000440375 PRPF40BQ6NWY9 871 aaKnown RBP15.7■□□□□ 0.1
PDGFB-203ENST00000440375 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 ABCC12Q96J65 1359 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 SLX4Q8IY92 1834 aa15.7■□□□□ 0.1
PDGFB-203ENST00000440375 MAP3K15Q6ZN16 1313 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 PROSER3Q2NL68 480 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 STYK1Q6J9G0 422 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 ARFGEF2Q9Y6D5 1785 aa15.69■□□□□ 0.1
PDGFB-203ENST00000440375 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 ANXA1P04083 346 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 HSPA6P17066 643 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 PDIA6Q15084 440 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 KRT24Q2M2I5 525 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
PDGFB-203ENST00000440375 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 KLRG2A4D1S0 409 aaPredicted RBP15.67■□□□□ 0.1
PDGFB-203ENST00000440375 ERVV-1B6SEH8 477 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 GPTP24298 496 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 MASTLQ96GX5 879 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
PDGFB-203ENST00000440375 NUP98P52948 1817 aa15.66■□□□□ 0.1
PDGFB-203ENST00000440375 TOMM70O94826 608 aa15.66■□□□□ 0.1
PDGFB-203ENST00000440375 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
PDGFB-203ENST00000440375 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
PDGFB-203ENST00000440375 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
PDGFB-203ENST00000440375 BABAM1Q9NWV8 329 aa15.66■□□□□ 0.1
PDGFB-203ENST00000440375 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
PDGFB-203ENST00000440375 CHL1O00533 1208 aa15.65■□□□□ 0.1
PDGFB-203ENST00000440375 NPR1P16066 1061 aa15.65■□□□□ 0.1
PDGFB-203ENST00000440375 OLFM4Q6UX06 510 aa15.65■□□□□ 0.1
PDGFB-203ENST00000440375 C7orf43Q8WVR3 580 aa15.65■□□□□ 0.1
PDGFB-203ENST00000440375 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
PDGFB-203ENST00000440375 CCDC88AQ3V6T2 1871 aa15.64■□□□□ 0.09
PDGFB-203ENST00000440375 ERFEQ4G0M1 354 aa15.64■□□□□ 0.09
PDGFB-203ENST00000440375 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
PDGFB-203ENST00000440375 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
PDGFB-203ENST00000440375 LTBP3Q9NS15 1303 aa15.64■□□□□ 0.09
PDGFB-203ENST00000440375 IBTKQ9P2D0 1353 aaPredicted RBP15.63■□□□□ 0.09
PDGFB-203ENST00000440375 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
PDGFB-203ENST00000440375 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
PDGFB-203ENST00000440375 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
PDGFB-203ENST00000440375 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
PDGFB-203ENST00000440375 GLTPD2A6NH11 291 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 NTSR2O95665 410 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-203ENST00000440375 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 C3orf67Q6ZVT6 689 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
PDGFB-203ENST00000440375 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
PDGFB-203ENST00000440375 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
PDGFB-203ENST00000440375 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
PDGFB-203ENST00000440375 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
PDGFB-203ENST00000440375 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
PDGFB-203ENST00000440375 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
PDGFB-203ENST00000440375 APAF1O14727 1248 aa15.6■□□□□ 0.09
PDGFB-203ENST00000440375 AIMP1Q12904 312 aaKnown RBP15.6■□□□□ 0.09
PDGFB-203ENST00000440375 SOGA3Q5TF21 947 aa15.6■□□□□ 0.09
PDGFB-203ENST00000440375 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
PDGFB-203ENST00000440375 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
PDGFB-203ENST00000440375 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
PDGFB-203ENST00000440375 POTECB2RU33 542 aa15.59■□□□□ 0.09
PDGFB-203ENST00000440375 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
PDGFB-203ENST00000440375 MBIPQ9NS73 344 aa15.59■□□□□ 0.09
PDGFB-203ENST00000440375 WDR90Q96KV7 1748 aa15.59■□□□□ 0.09
PDGFB-203ENST00000440375 ANKRD36CQ5JPF3 1778 aa15.58■□□□□ 0.08
PDGFB-203ENST00000440375 HDGFL1Q5TGJ6 251 aa15.58■□□□□ 0.08
PDGFB-203ENST00000440375 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms