RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 FEZ2Q9UHY8 353 aaPredicted RBP18.66■□□□□ 0.58
DHFR-201ENST00000439211 MED14O60244 1454 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 ATP7BP35670 1465 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
DHFR-201ENST00000439211 CLASRPQ8N2M8 674 aaKnown RBP18.66■□□□□ 0.58
DHFR-201ENST00000439211 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
DHFR-201ENST00000439211 PTGS1P23219 599 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 SLC20A2Q08357 652 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
DHFR-201ENST00000439211 BANK1Q8NDB2 785 aa18.66■□□□□ 0.58
DHFR-201ENST00000439211 EFCC1Q9HA90 598 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 KDM4AO75164 1064 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 TPM4P67936 248 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 KIAA1524Q8TCG1 905 aa18.65■□□□□ 0.58
DHFR-201ENST00000439211 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 CNPY4Q8N129 248 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 CCDC191Q8NCU4 936 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 NEK11Q8NG66 645 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 PAXBP1Q9Y5B6 917 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 CCDC186Q7Z3E2 898 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 DRC1Q96MC2 740 aa18.64■□□□□ 0.57
DHFR-201ENST00000439211 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 ST7Q9NRC1 585 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
DHFR-201ENST00000439211 NCOA3Q9Y6Q9 1424 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 PI4KAP2A4QPH2 592 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
DHFR-201ENST00000439211 FAM193AP78312 1265 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 PI4KAP1Q8N8J0 262 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 ATP6V1DQ9Y5K8 247 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 ZKSCAN1P17029 563 aaPredicted RBP18.63■□□□□ 0.57
DHFR-201ENST00000439211 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
DHFR-201ENST00000439211 CEP135Q66GS9 1140 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 MYCBPQ99417 103 aaPredicted RBP18.62■□□□□ 0.57
DHFR-201ENST00000439211 ARGLU1Q9NWB6 273 aaPredicted RBP18.62■□□□□ 0.57
DHFR-201ENST00000439211 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
DHFR-201ENST00000439211 GIMAP6Q6P9H5 292 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 CTR9Q6PD62 1173 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 CPA1P15085 419 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 RHPN1Q8TCX5 695 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
DHFR-201ENST00000439211 MORC2Q9Y6X9 1032 aaPredicted RBP18.62■□□□□ 0.57
DHFR-201ENST00000439211 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
DHFR-201ENST00000439211 C1orf141Q5JVX7 400 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
DHFR-201ENST00000439211 SIL1Q9H173 461 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 PSME1Q06323 249 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 PTPN14Q15678 1187 aa18.61■□□□□ 0.57
DHFR-201ENST00000439211 ELF2Q15723 593 aa18.6■□□□□ 0.57
DHFR-201ENST00000439211 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
DHFR-201ENST00000439211 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
DHFR-201ENST00000439211 TXLNBQ8N3L3 684 aa18.6■□□□□ 0.57
DHFR-201ENST00000439211 AXDND1Q5T1B0 1012 aaPredicted RBP18.6■□□□□ 0.57
DHFR-201ENST00000439211 FERMT3Q86UX7 667 aa18.6■□□□□ 0.57
DHFR-201ENST00000439211 GADD45BO75293 160 aaPredicted RBP18.59■□□□□ 0.57
DHFR-201ENST00000439211 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
DHFR-201ENST00000439211 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
DHFR-201ENST00000439211 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 TRMT1Q9NXH9 659 aaKnown RBP18.59■□□□□ 0.57
DHFR-201ENST00000439211 AK9Q5TCS8 1911 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 ZDHHC9Q9Y397 364 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 FLT4P35916 1363 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 LTKP29376 864 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 CNPY2Q9Y2B0 182 aa18.59■□□□□ 0.57
DHFR-201ENST00000439211 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.57
DHFR-201ENST00000439211 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.57
DHFR-201ENST00000439211 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.57
DHFR-201ENST00000439211 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
DHFR-201ENST00000439211 CCDC192P0DO97 292 aa18.58■□□□□ 0.56
DHFR-201ENST00000439211 DNAAF4Q8WXU2 420 aa18.58■□□□□ 0.56
DHFR-201ENST00000439211 AK7Q96M32 723 aa18.58■□□□□ 0.56
DHFR-201ENST00000439211 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
DHFR-201ENST00000439211 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
DHFR-201ENST00000439211 ZNF215Q9UL58 517 aaPredicted RBP18.57■□□□□ 0.56
DHFR-201ENST00000439211 AACSQ86V21 672 aa18.57■□□□□ 0.56
DHFR-201ENST00000439211 THEMISQ8N1K5 641 aaPredicted RBP18.57■□□□□ 0.56
DHFR-201ENST00000439211 A2ML1A8K2U0 1454 aa18.57■□□□□ 0.56
DHFR-201ENST00000439211 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
DHFR-201ENST00000439211 TMCO3Q6UWJ1 677 aa18.57■□□□□ 0.56
DHFR-201ENST00000439211 CTIFO43310 598 aaKnown RBP18.56■□□□□ 0.56
DHFR-201ENST00000439211 NBPF7P0C2Y1 421 aaPredicted RBP18.56■□□□□ 0.56
DHFR-201ENST00000439211 ANAPC15P60006 121 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 LEKR1Q6ZMV7 388 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
DHFR-201ENST00000439211 LRMPQ12912 555 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 STK3Q13188 491 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms