RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 MYH16Q9H6N6 1097 aa21.15■□□□□ 0.98
CTSD-205ENST00000438213 MAP3K15Q6ZN16 1313 aa21.14■□□□□ 0.97
CTSD-205ENST00000438213 PROSER3Q2NL68 480 aa21.14■□□□□ 0.97
CTSD-205ENST00000438213 HYPKQ9NX55 129 aa21.14■□□□□ 0.97
CTSD-205ENST00000438213 CHPF2Q9P2E5 772 aa21.14■□□□□ 0.97
CTSD-205ENST00000438213 ANXA1P04083 346 aa21.13■□□□□ 0.97
CTSD-205ENST00000438213 GPR162Q16538 588 aa21.13■□□□□ 0.97
CTSD-205ENST00000438213 CCDC30Q5VVM6 783 aa21.13■□□□□ 0.97
CTSD-205ENST00000438213 COPS6Q7L5N1 327 aa21.13■□□□□ 0.97
CTSD-205ENST00000438213 LRP10Q7Z4F1 713 aa21.13■□□□□ 0.97
CTSD-205ENST00000438213 NPHP1O15259 732 aa21.12■□□□□ 0.97
CTSD-205ENST00000438213 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
CTSD-205ENST00000438213 HLFQ16534 295 aa21.12■□□□□ 0.97
CTSD-205ENST00000438213 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
CTSD-205ENST00000438213 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
CTSD-205ENST00000438213 NIP7Q9Y221 180 aaKnown RBP eCLIP21.12■□□□□ 0.974e-13■□□□□ 10.1
CTSD-205ENST00000438213 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
CTSD-205ENST00000438213 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
CTSD-205ENST00000438213 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
CTSD-205ENST00000438213 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
CTSD-205ENST00000438213 GIGYF2Q6Y7W6 1299 aaKnown RBP21.1■□□□□ 0.97
CTSD-205ENST00000438213 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
CTSD-205ENST00000438213 ZNF521Q96K83 1311 aa21.09■□□□□ 0.97
CTSD-205ENST00000438213 TPTE2Q6XPS3 522 aa21.09■□□□□ 0.97
CTSD-205ENST00000438213 NBPF5PQ86XG9 351 aaPredicted RBP21.09■□□□□ 0.97
CTSD-205ENST00000438213 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
CTSD-205ENST00000438213 C10orf71Q711Q0 1435 aa21.09■□□□□ 0.97
CTSD-205ENST00000438213 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
CTSD-205ENST00000438213 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
CTSD-205ENST00000438213 CNBD1Q8NA66 436 aa21.08■□□□□ 0.97
CTSD-205ENST00000438213 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
CTSD-205ENST00000438213 DPEP1P16444 411 aa21.07■□□□□ 0.96
CTSD-205ENST00000438213 ST5P78524 1137 aa21.07■□□□□ 0.96
CTSD-205ENST00000438213 EXOSC9Q06265 439 aaKnown RBP21.07■□□□□ 0.96
CTSD-205ENST00000438213 ANKRD13DQ6ZTN6 518 aa21.07■□□□□ 0.96
CTSD-205ENST00000438213 PDZRN3Q9UPQ7 1066 aa21.07■□□□□ 0.96
CTSD-205ENST00000438213 SCN7AQ01118 1682 aa21.07■□□□□ 0.96
CTSD-205ENST00000438213 E9PSI1 815 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 GRIN3BO60391 1043 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
CTSD-205ENST00000438213 PRR5LQ6MZQ0 368 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 PLBD2Q8NHP8 589 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 BRIP1Q9BX63 1249 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
CTSD-205ENST00000438213 VAMP4O75379 141 aa21.05■□□□□ 0.96
CTSD-205ENST00000438213 PDE6BP35913 854 aa21.05■□□□□ 0.96
CTSD-205ENST00000438213 ZNF34Q8IZ26 560 aa21.05■□□□□ 0.96
CTSD-205ENST00000438213 FAM177BA6PVY3 158 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 H0YIN7 160 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 GPTP24298 496 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 BCORQ6W2J9 1755 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
CTSD-205ENST00000438213 DDX58O95786 925 aaKnown RBP21.03■□□□□ 0.96
CTSD-205ENST00000438213 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
CTSD-205ENST00000438213 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
CTSD-205ENST00000438213 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
CTSD-205ENST00000438213 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
CTSD-205ENST00000438213 PXDNLA1KZ92 1463 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 KIF13BQ9NQT8 1826 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 CHRNA5P30532 468 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
CTSD-205ENST00000438213 AFDNP55196 1824 aaKnown RBP21.01■□□□□ 0.95
CTSD-205ENST00000438213 YBX3P16989 372 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■□□□ 12
CTSD-205ENST00000438213 KCNA3P22001 575 aa21.01■□□□□ 0.95
CTSD-205ENST00000438213 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
CTSD-205ENST00000438213 NUP98P52948 1817 aa21■□□□□ 0.95
CTSD-205ENST00000438213 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
CTSD-205ENST00000438213 DALRD3Q5D0E6 543 aaKnown RBP21■□□□□ 0.95
CTSD-205ENST00000438213 SUSD4Q5VX71 490 aa21■□□□□ 0.95
CTSD-205ENST00000438213 WWC3Q9ULE0 1092 aa21■□□□□ 0.95
CTSD-205ENST00000438213 BCS1LQ9Y276 419 aa21■□□□□ 0.95
CTSD-205ENST00000438213 UTP14AQ9BVJ6 771 aaKnown RBP20.99■□□□□ 0.95
CTSD-205ENST00000438213 UBN2Q6ZU65 1347 aa20.98■□□□□ 0.95
CTSD-205ENST00000438213 NLRP10Q86W26 655 aa20.97■□□□□ 0.95
CTSD-205ENST00000438213 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
CTSD-205ENST00000438213 ZNF622Q969S3 477 aaKnown RBP eCLIP20.97■□□□□ 0.95
CTSD-205ENST00000438213 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
CTSD-205ENST00000438213 IBTKQ9P2D0 1353 aaPredicted RBP20.97■□□□□ 0.95
CTSD-205ENST00000438213 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
CTSD-205ENST00000438213 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
CTSD-205ENST00000438213 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
CTSD-205ENST00000438213 KSR2Q6VAB6 950 aa20.96■□□□□ 0.95
CTSD-205ENST00000438213 NUTM1Q86Y26 1132 aa20.96■□□□□ 0.95
CTSD-205ENST00000438213 N4BP2Q86UW6 1770 aaPredicted RBP20.95■□□□□ 0.94
CTSD-205ENST00000438213 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
CTSD-205ENST00000438213 NTSR2O95665 410 aa20.95■□□□□ 0.94
CTSD-205ENST00000438213 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
CTSD-205ENST00000438213 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
CTSD-205ENST00000438213 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
CTSD-205ENST00000438213 TRMT112Q9UI30 125 aaKnown RBP20.95■□□□□ 0.94
CTSD-205ENST00000438213 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.94
CTSD-205ENST00000438213 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
CTSD-205ENST00000438213 SRGNP10124 158 aa20.94■□□□□ 0.94
CTSD-205ENST00000438213 FLIIQ13045 1269 aa20.94■□□□□ 0.94
CTSD-205ENST00000438213 STYK1Q6J9G0 422 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms