RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
GSE1-206ENST00000438180 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
GSE1-206ENST00000438180 C8orf37Q96NL8 207 aa20.74■□□□□ 0.91
GSE1-206ENST00000438180 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
GSE1-206ENST00000438180 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
GSE1-206ENST00000438180 A1BGP04217 495 aa20.73■□□□□ 0.91
GSE1-206ENST00000438180 PIP4K2AP48426 406 aaPredicted RBP20.73■□□□□ 0.91
GSE1-206ENST00000438180 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
GSE1-206ENST00000438180 FNBP4Q8N3X1 1017 aaPredicted RBP20.73■□□□□ 0.91
GSE1-206ENST00000438180 SYTL4Q96C24 671 aaPredicted RBP20.73■□□□□ 0.91
GSE1-206ENST00000438180 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
GSE1-206ENST00000438180 BCL9LQ86UU0 1499 aa20.72■□□□□ 0.91
GSE1-206ENST00000438180 COL15A1P39059 1388 aa20.72■□□□□ 0.91
GSE1-206ENST00000438180 SMARCA5O60264 1052 aaPredicted RBP20.72■□□□□ 0.91
GSE1-206ENST00000438180 OSBPL3Q9H4L5 887 aa20.72■□□□□ 0.91
GSE1-206ENST00000438180 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
GSE1-206ENST00000438180 PRIM1P49642 420 aaKnown RBP20.7■□□□□ 0.9
GSE1-206ENST00000438180 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
GSE1-206ENST00000438180 ERC1Q8IUD2 1116 aa20.7■□□□□ 0.9
GSE1-206ENST00000438180 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
GSE1-206ENST00000438180 CDC45O75419 566 aa20.69■□□□□ 0.9
GSE1-206ENST00000438180 SEC24BO95487 1268 aa20.69■□□□□ 0.9
GSE1-206ENST00000438180 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
GSE1-206ENST00000438180 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
GSE1-206ENST00000438180 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
GSE1-206ENST00000438180 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
GSE1-206ENST00000438180 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
GSE1-206ENST00000438180 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
GSE1-206ENST00000438180 AOX1Q06278 1338 aa20.68■□□□□ 0.9
GSE1-206ENST00000438180 TBC1D32Q96NH3 1257 aa20.67■□□□□ 0.9
GSE1-206ENST00000438180 PDE1AP54750 535 aa20.67■□□□□ 0.9
GSE1-206ENST00000438180 OS9Q13438 667 aaPredicted RBP20.67■□□□□ 0.9
GSE1-206ENST00000438180 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
GSE1-206ENST00000438180 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
GSE1-206ENST00000438180 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
GSE1-206ENST00000438180 CWC25Q9NXE8 425 aaPredicted RBP20.67■□□□□ 0.9
GSE1-206ENST00000438180 MSH5O43196 834 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 GSPT1P15170 499 aaKnown RBP20.66■□□□□ 0.9
GSE1-206ENST00000438180 MX1P20591 662 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 CCDC191Q8NCU4 936 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 RHPN1Q8TCX5 695 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 BCL11AQ9H165 835 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 USP21Q9UK80 565 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 TJP1Q07157 1748 aa20.66■□□□□ 0.9
GSE1-206ENST00000438180 CICQ96RK0 1608 aaPredicted RBP20.65■□□□□ 0.9
GSE1-206ENST00000438180 A0A087WZG4 1122 aa20.65■□□□□ 0.9
GSE1-206ENST00000438180 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
GSE1-206ENST00000438180 MEX3CQ5U5Q3 659 aaKnown RBP20.65■□□□□ 0.9
GSE1-206ENST00000438180 OTUD7AQ8TE49 926 aaPredicted RBP20.65■□□□□ 0.9
GSE1-206ENST00000438180 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
GSE1-206ENST00000438180 SALL3Q9BXA9 1300 aa20.65■□□□□ 0.9
GSE1-206ENST00000438180 CYP19A1P11511 503 aaPredicted RBP20.64■□□□□ 0.9
GSE1-206ENST00000438180 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.9
GSE1-206ENST00000438180 DAXXQ9UER7 740 aaPredicted RBP20.64■□□□□ 0.9
GSE1-206ENST00000438180 STAP2Q9UGK3 403 aa20.64■□□□□ 0.9
GSE1-206ENST00000438180 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
GSE1-206ENST00000438180 KAZALD1Q96I82 304 aa20.64■□□□□ 0.89
GSE1-206ENST00000438180 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.89
GSE1-206ENST00000438180 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
GSE1-206ENST00000438180 UBE3BQ7Z3V4 1068 aa20.63■□□□□ 0.89
GSE1-206ENST00000438180 A0A0G2JS52 829 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
GSE1-206ENST00000438180 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
GSE1-206ENST00000438180 HSP90AB3PQ58FF7 597 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 CLASRPQ8N2M8 674 aaKnown RBP20.61■□□□□ 0.89
GSE1-206ENST00000438180 C22orf23Q9BZE7 217 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 ZNF330Q9Y3S2 320 aaPredicted RBP20.61■□□□□ 0.89
GSE1-206ENST00000438180 THSD7AQ9UPZ6 1657 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 H7C1W4 665 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 SDSP20132 328 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 TRIM28Q13263 835 aaKnown RBP20.61■□□□□ 0.89
GSE1-206ENST00000438180 TCIRG1Q13488 830 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 ACSBG1Q96GR2 724 aa20.61■□□□□ 0.89
GSE1-206ENST00000438180 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
GSE1-206ENST00000438180 HSPA1LP34931 641 aa20.6■□□□□ 0.89
GSE1-206ENST00000438180 IL6STP40189 918 aaPredicted RBP20.6■□□□□ 0.89
GSE1-206ENST00000438180 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
GSE1-206ENST00000438180 IL1RAPL2Q9NP60 686 aa20.6■□□□□ 0.89
GSE1-206ENST00000438180 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
GSE1-206ENST00000438180 TUBGCP6Q96RT7 1819 aa20.59■□□□□ 0.89
GSE1-206ENST00000438180 CASP7P55210 303 aa20.59■□□□□ 0.89
GSE1-206ENST00000438180 MYT1Q01538 1121 aa20.59■□□□□ 0.89
GSE1-206ENST00000438180 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
GSE1-206ENST00000438180 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
GSE1-206ENST00000438180 BECN1Q14457 450 aa20.58■□□□□ 0.89
GSE1-206ENST00000438180 PALLDQ8WX93 1383 aa20.58■□□□□ 0.89
GSE1-206ENST00000438180 LOC102724428A0A0B4J2F2 783 aa20.58■□□□□ 0.88
GSE1-206ENST00000438180 SIK1P57059 783 aa20.58■□□□□ 0.88
GSE1-206ENST00000438180 TTC41PQ6P2S7 1318 aa20.58■□□□□ 0.88
GSE1-206ENST00000438180 ANKRD36CQ5JPF3 1778 aa20.57■□□□□ 0.88
GSE1-206ENST00000438180 ATP6V1AP38606 617 aa20.57■□□□□ 0.88
GSE1-206ENST00000438180 GIGYF2Q6Y7W6 1299 aaKnown RBP20.57■□□□□ 0.88
GSE1-206ENST00000438180 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
GSE1-206ENST00000438180 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
GSE1-206ENST00000438180 RREB1Q92766 1687 aa20.57■□□□□ 0.88
GSE1-206ENST00000438180 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
GSE1-206ENST00000438180 ERVV-1B6SEH8 477 aa20.56■□□□□ 0.88
GSE1-206ENST00000438180 RBM25P49756 843 aaKnown RBP20.56■□□□□ 0.88
GSE1-206ENST00000438180 PA2G4Q9UQ80 394 aaKnown RBP20.56■□□□□ 0.88
GSE1-206ENST00000438180 ERC2O15083 957 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms