RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 XAGE3Q8WTP9 111 aa31.66■■■□□ 2.66
CPNE1-216ENST00000437340 LAMB4A4D0S4 1761 aa31.65■■■□□ 2.66
CPNE1-216ENST00000437340 GRM8O00222 908 aa31.65■■■□□ 2.66
CPNE1-216ENST00000437340 MYL6BP14649 208 aa31.65■■■□□ 2.66
CPNE1-216ENST00000437340 NEXNQ0ZGT2 675 aa31.65■■■□□ 2.66
CPNE1-216ENST00000437340 VPS72Q15906 364 aa31.65■■■□□ 2.66
CPNE1-216ENST00000437340 CWF19L2Q2TBE0 894 aaKnown RBP31.65■■■□□ 2.66
CPNE1-216ENST00000437340 COPS6Q7L5N1 327 aa31.64■■■□□ 2.66
CPNE1-216ENST00000437340 USP21Q9UK80 565 aa31.64■■■□□ 2.66
CPNE1-216ENST00000437340 KIF1BPQ96EK5 621 aa31.63■■■□□ 2.65
CPNE1-216ENST00000437340 CDCA7Q9BWT1 371 aaPredicted RBP31.63■■■□□ 2.65
CPNE1-216ENST00000437340 METTL22Q9BUU2 404 aaPredicted RBP31.63■■■□□ 2.65
CPNE1-216ENST00000437340 RTL5Q5HYW3 569 aaPredicted RBP31.62■■■□□ 2.65
CPNE1-216ENST00000437340 UBR2Q8IWV8 1755 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 BARGINQ6ZT62 677 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 RHPN1Q8TCX5 695 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 PAPPAQ13219 1627 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 EXOC5O00471 708 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 ANKRD13DQ6ZTN6 518 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 SNX21Q969T3 373 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 ITGB4P16144 1822 aa31.61■■■□□ 2.65
CPNE1-216ENST00000437340 IGKV5-2P06315 115 aa31.6■■■□□ 2.65
CPNE1-216ENST00000437340 NEURL1BA8MQ27 555 aa31.58■■■□□ 2.65
CPNE1-216ENST00000437340 AFF2P51816 1311 aa31.58■■■□□ 2.65
CPNE1-216ENST00000437340 KCPQ6ZWJ8 1503 aa31.58■■■□□ 2.65
CPNE1-216ENST00000437340 HSCBQ8IWL3 235 aa31.56■■■□□ 2.64
CPNE1-216ENST00000437340 KIF2CQ99661 725 aa31.56■■■□□ 2.64
CPNE1-216ENST00000437340 GCKRQ14397 625 aa31.56■■■□□ 2.64
CPNE1-216ENST00000437340 DOT1LQ8TEK3 1739 aa31.55■■■□□ 2.64
CPNE1-216ENST00000437340 DDB1Q16531 1140 aa31.55■■■□□ 2.64
CPNE1-216ENST00000437340 SUCLG2Q96I99 432 aa31.55■■■□□ 2.64
CPNE1-216ENST00000437340 IL1RAPL2Q9NP60 686 aa31.55■■■□□ 2.64
CPNE1-216ENST00000437340 TUBGCP6Q96RT7 1819 aa31.55■■■□□ 2.64
CPNE1-216ENST00000437340 FAM98CQ17RN3 349 aaKnown RBP31.54■■■□□ 2.64
CPNE1-216ENST00000437340 ERC1Q8IUD2 1116 aa31.54■■■□□ 2.64
CPNE1-216ENST00000437340 MYD88Q99836 296 aa31.54■■■□□ 2.64
CPNE1-216ENST00000437340 REC8O95072 547 aa31.53■■■□□ 2.64
CPNE1-216ENST00000437340 KAZALD1Q96I82 304 aa31.53■■■□□ 2.64
CPNE1-216ENST00000437340 USP26Q9BXU7 913 aa31.53■■■□□ 2.64
CPNE1-216ENST00000437340 THSD7AQ9UPZ6 1657 aa31.53■■■□□ 2.64
CPNE1-216ENST00000437340 PLBD2Q8NHP8 589 aa31.53■■■□□ 2.64
CPNE1-216ENST00000437340 ANTXR1Q9H6X2 564 aa31.52■■■□□ 2.64
CPNE1-216ENST00000437340 KAT6BQ8WYB5 2073 aa31.51■■■□□ 2.64
CPNE1-216ENST00000437340 ERC2O15083 957 aa31.51■■■□□ 2.64
CPNE1-216ENST00000437340 BICC1Q9H694 974 aaKnown RBP31.51■■■□□ 2.64
CPNE1-216ENST00000437340 COL15A1P39059 1388 aa31.51■■■□□ 2.64
CPNE1-216ENST00000437340 TSHZ3Q63HK5 1081 aa31.51■■■□□ 2.63
CPNE1-216ENST00000437340 ATRNO75882 1429 aa31.5■■■□□ 2.63
CPNE1-216ENST00000437340 USP42Q9H9J4 1324 aaKnown RBP31.5■■■□□ 2.63
CPNE1-216ENST00000437340 NFKBIBQ15653 356 aa31.5■■■□□ 2.63
CPNE1-216ENST00000437340 TMOD3Q9NYL9 352 aa31.5■■■□□ 2.63
CPNE1-216ENST00000437340 OS9Q13438 667 aaPredicted RBP31.49■■■□□ 2.63
CPNE1-216ENST00000437340 NBPF26B4DH59 902 aa31.48■■■□□ 2.63
CPNE1-216ENST00000437340 NBPF14Q5TI25 921 aa31.48■■■□□ 2.63
CPNE1-216ENST00000437340 NBPF10Q6P3W6 841 aaKnown RBP31.48■■■□□ 2.63
CPNE1-216ENST00000437340 NBPF15Q8N660 670 aa31.48■■■□□ 2.63
CPNE1-216ENST00000437340 PIP4K2AP48426 406 aaPredicted RBP31.48■■■□□ 2.63
CPNE1-216ENST00000437340 NUTM1Q86Y26 1132 aa31.48■■■□□ 2.63
CPNE1-216ENST00000437340 ARFGEF2Q9Y6D5 1785 aa31.47■■■□□ 2.63
CPNE1-216ENST00000437340 CLASRPQ8N2M8 674 aaKnown RBP31.47■■■□□ 2.63
CPNE1-216ENST00000437340 SLKQ9H2G2 1235 aaPredicted RBP31.47■■■□□ 2.63
CPNE1-216ENST00000437340 MARCH10Q8NA82 808 aaPredicted RBP31.46■■■□□ 2.63
CPNE1-216ENST00000437340 TTC41PQ6P2S7 1318 aa31.46■■■□□ 2.63
CPNE1-216ENST00000437340 PI4K2BQ8TCG2 481 aa31.45■■■□□ 2.63
CPNE1-216ENST00000437340 TRIM6-TRIM34B2RNG4 842 aa31.45■■■□□ 2.62
CPNE1-216ENST00000437340 PTCD1O75127 700 aaKnown RBP31.44■■■□□ 2.62
CPNE1-216ENST00000437340 RABEP1Q15276 862 aa31.44■■■□□ 2.62
CPNE1-216ENST00000437340 VSIG10Q8N0Z9 540 aa31.44■■■□□ 2.62
CPNE1-216ENST00000437340 GJD4Q96KN9 370 aaPredicted RBP31.44■■■□□ 2.62
CPNE1-216ENST00000437340 TEX13AQ9BXU3 409 aaPredicted RBP31.43■■■□□ 2.62
CPNE1-216ENST00000437340 CHMLP26374 656 aa31.43■■■□□ 2.62
CPNE1-216ENST00000437340 RILPL2Q969X0 211 aa31.43■■■□□ 2.62
CPNE1-216ENST00000437340 ESYT1Q9BSJ8 1104 aa31.43■■■□□ 2.62
CPNE1-216ENST00000437340 TRPC5Q9UL62 973 aaPredicted RBP31.43■■■□□ 2.62
CPNE1-216ENST00000437340 PA2G4Q9UQ80 394 aaKnown RBP31.43■■■□□ 2.62
CPNE1-216ENST00000437340 G3BP1Q13283 466 aaKnown RBP eCLIP31.42■■■□□ 2.622e-8■□□□□ 11.1
CPNE1-216ENST00000437340 PIGBQ92521 554 aa31.41■■■□□ 2.62
CPNE1-216ENST00000437340 BCL9O00512 1426 aa31.4■■■□□ 2.62
CPNE1-216ENST00000437340 EPB41L2O43491 1005 aaKnown RBP31.4■■■□□ 2.62
CPNE1-216ENST00000437340 A1BGP04217 495 aa31.4■■■□□ 2.62
CPNE1-216ENST00000437340 RABL6Q3YEC7 729 aaPredicted RBP31.4■■■□□ 2.62
CPNE1-216ENST00000437340 AFDNP55196 1824 aaKnown RBP31.39■■■□□ 2.62
CPNE1-216ENST00000437340 A0A0G2JS52 829 aa31.39■■■□□ 2.62
CPNE1-216ENST00000437340 GLRX3O76003 335 aaKnown RBP31.39■■■□□ 2.62
CPNE1-216ENST00000437340 GPATCH3Q96I76 525 aa31.39■■■□□ 2.62
CPNE1-216ENST00000437340 A0A087WZG4 1122 aa31.37■■■□□ 2.61
CPNE1-216ENST00000437340 CASP7P55210 303 aa31.37■■■□□ 2.61
CPNE1-216ENST00000437340 EPHA10Q5JZY3 1008 aa31.37■■■□□ 2.61
CPNE1-216ENST00000437340 CNTROBQ8N137 903 aa31.37■■■□□ 2.61
CPNE1-216ENST00000437340 NUP188Q5SRE5 1749 aa31.37■■■□□ 2.61
CPNE1-216ENST00000437340 K7ELQ4 463 aaPredicted RBP31.36■■■□□ 2.61
CPNE1-216ENST00000437340 IFIT2P09913 472 aaKnown RBP31.36■■■□□ 2.61
CPNE1-216ENST00000437340 TTLL7Q6ZT98 887 aa31.36■■■□□ 2.61
CPNE1-216ENST00000437340 UBE3BQ7Z3V4 1068 aa31.36■■■□□ 2.61
CPNE1-216ENST00000437340 COPRSQ9NQ92 184 aa31.36■■■□□ 2.61
CPNE1-216ENST00000437340 CHMP5Q9NZZ3 219 aa31.36■■■□□ 2.61
CPNE1-216ENST00000437340 ATP5J2-PTCD1G3V325 749 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 SASH1O94885 1247 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 FBXO41Q8TF61 875 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 RBM42Q9BTD8 480 aaKnown RBP31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms