RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 KAZALD1Q96I82 304 aa30.11■■■□□ 2.41
LMBR1-209ENST00000434453 SPG7Q9UQ90 795 aa30.1■■■□□ 2.41
LMBR1-209ENST00000434453 CLASRPQ8N2M8 674 aaKnown RBP30.09■■■□□ 2.41
LMBR1-209ENST00000434453 PDIA6Q15084 440 aa30.08■■■□□ 2.41
LMBR1-209ENST00000434453 HYPKQ9NX55 129 aa30.08■■■□□ 2.41
LMBR1-209ENST00000434453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.08■■■□□ 2.41
LMBR1-209ENST00000434453 C5P01031 1676 aa30.08■■■□□ 2.41
LMBR1-209ENST00000434453 UTYO14607 1347 aa30.07■■■□□ 2.4
LMBR1-209ENST00000434453 KRT28Q7Z3Y7 464 aa30.07■■■□□ 2.4
LMBR1-209ENST00000434453 LINS1Q8NG48 757 aa30.07■■■□□ 2.4
LMBR1-209ENST00000434453 SUCLG2Q96I99 432 aa30.07■■■□□ 2.4
LMBR1-209ENST00000434453 ECHDC1Q9NTX5 307 aa30.07■■■□□ 2.4
LMBR1-209ENST00000434453 SCN11AQ9UI33 1791 aa30.06■■■□□ 2.4
LMBR1-209ENST00000434453 RPAP1Q9BWH6 1393 aaPredicted RBP30.06■■■□□ 2.4
LMBR1-209ENST00000434453 ERBB3P21860 1342 aa30.06■■■□□ 2.4
LMBR1-209ENST00000434453 DDX21Q9NR30 783 aaKnown RBP eCLIP30.06■■■□□ 2.4
LMBR1-209ENST00000434453 GRM8O00222 908 aa30.05■■■□□ 2.4
LMBR1-209ENST00000434453 RUFY3Q7L099 469 aa30.05■■■□□ 2.4
LMBR1-209ENST00000434453 ALS2Q96Q42 1657 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 MBD3O95983 291 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 AK2P54819 239 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 PTH1RQ03431 593 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 LRSAM1Q6UWE0 723 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 SYCE3A1L190 88 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 KIAA1211Q6ZU35 1233 aa30.04■■■□□ 2.4
LMBR1-209ENST00000434453 ERC1Q8IUD2 1116 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 MST1RQ04912 1400 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 KIF1AQ12756 1690 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 C1orf167Q5SNV9 1468 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 SASH1O94885 1247 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 LARP6Q9BRS8 491 aaKnown RBP30.03■■■□□ 2.4
LMBR1-209ENST00000434453 BICC1Q9H694 974 aaKnown RBP30.03■■■□□ 2.4
LMBR1-209ENST00000434453 DIAPH3Q9NSV4 1193 aa30.03■■■□□ 2.4
LMBR1-209ENST00000434453 KDM6AO15550 1401 aaPredicted RBP30.02■■■□□ 2.4
LMBR1-209ENST00000434453 IGKV5-2P06315 115 aa30.02■■■□□ 2.4
LMBR1-209ENST00000434453 IFIT2P09913 472 aaKnown RBP30.02■■■□□ 2.4
LMBR1-209ENST00000434453 CPA1P15085 419 aa30.02■■■□□ 2.4
LMBR1-209ENST00000434453 AIMP1Q12904 312 aaKnown RBP30.02■■■□□ 2.4
LMBR1-209ENST00000434453 ANP32BQ92688 251 aaKnown RBP30.02■■■□□ 2.4
LMBR1-209ENST00000434453 WDR33Q9C0J8 1336 aaKnown RBP30.01■■■□□ 2.4
LMBR1-209ENST00000434453 SLC39A6Q13433 755 aa30.01■■■□□ 2.39
LMBR1-209ENST00000434453 AACSQ86V21 672 aa30.01■■■□□ 2.39
LMBR1-209ENST00000434453 HDAC5Q9UQL6 1122 aa30■■■□□ 2.39
LMBR1-209ENST00000434453 ZC3H6P61129 1189 aaKnown RBP30■■■□□ 2.39
LMBR1-209ENST00000434453 FOXD4L6Q3SYB3 417 aaPredicted RBP30■■■□□ 2.39
LMBR1-209ENST00000434453 ZNF790Q6PG37 636 aa30■■■□□ 2.39
LMBR1-209ENST00000434453 FOXD4L3Q6VB84 417 aaPredicted RBP30■■■□□ 2.39
LMBR1-209ENST00000434453 PDLIM2Q96JY6 352 aa30■■■□□ 2.39
LMBR1-209ENST00000434453 GDPD2Q9HCC8 539 aa30■■■□□ 2.39
LMBR1-209ENST00000434453 LIMCH1Q9UPQ0 1083 aa30■■■□□ 2.39
LMBR1-209ENST00000434453 EAF2Q96CJ1 260 aaPredicted RBP29.99■■■□□ 2.39
LMBR1-209ENST00000434453 RUFY2Q8WXA3 655 aa29.99■■■□□ 2.39
LMBR1-209ENST00000434453 KCNB2Q92953 911 aa29.99■■■□□ 2.39
LMBR1-209ENST00000434453 GADD45BO75293 160 aaPredicted RBP29.98■■■□□ 2.39
LMBR1-209ENST00000434453 DDX58O95786 925 aaKnown RBP29.98■■■□□ 2.39
LMBR1-209ENST00000434453 CASTP20810 708 aaKnown RBP29.98■■■□□ 2.39
LMBR1-209ENST00000434453 ADCK5Q3MIX3 580 aa29.98■■■□□ 2.39
LMBR1-209ENST00000434453 LARGE1O95461 756 aa29.98■■■□□ 2.39
LMBR1-209ENST00000434453 EVI5LQ96CN4 794 aa29.98■■■□□ 2.39
LMBR1-209ENST00000434453 GPATCH3Q96I76 525 aa29.98■■■□□ 2.39
LMBR1-209ENST00000434453 SLC52A2Q9HAB3 445 aa29.97■■■□□ 2.39
LMBR1-209ENST00000434453 NPHP3Q7Z494 1330 aa29.97■■■□□ 2.39
LMBR1-209ENST00000434453 PROSER2Q86WR7 435 aaPredicted RBP29.96■■■□□ 2.39
LMBR1-209ENST00000434453 USP48Q86UV5 1035 aa29.96■■■□□ 2.39
LMBR1-209ENST00000434453 PRPF40BQ6NWY9 871 aaKnown RBP29.95■■■□□ 2.39
LMBR1-209ENST00000434453 TLR7Q9NYK1 1049 aaKnown RBP29.95■■■□□ 2.39
LMBR1-209ENST00000434453 NECTIN1Q15223 517 aa29.95■■■□□ 2.38
LMBR1-209ENST00000434453 ZSCAN30Q86W11 494 aa29.95■■■□□ 2.38
LMBR1-209ENST00000434453 COL18A1P39060 1754 aa29.95■■■□□ 2.38
LMBR1-209ENST00000434453 MEGF6O75095 1541 aa29.94■■■□□ 2.38
LMBR1-209ENST00000434453 CCDC8Q9H0W5 538 aaPredicted RBP29.94■■■□□ 2.38
LMBR1-209ENST00000434453 CCDC171Q6TFL3 1326 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 NEURL1BA8MQ27 555 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 SYT1P21579 422 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 G3BP1Q13283 466 aaKnown RBP eCLIP29.93■■■□□ 2.38
LMBR1-209ENST00000434453 RIC3Q7Z5B4 369 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 TMEM87AQ8NBN3 555 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 NFATC2IPQ8NCF5 419 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 RAPGEF4Q8WZA2 1011 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 FAM227BQ96M60 508 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 NAP1L5Q96NT1 182 aaPredicted RBP29.93■■■□□ 2.38
LMBR1-209ENST00000434453 ZSWIM6Q9HCJ5 1215 aa29.93■■■□□ 2.38
LMBR1-209ENST00000434453 ZSCAN22P10073 491 aaPredicted RBP29.92■■■□□ 2.38
LMBR1-209ENST00000434453 PHKG2P15735 406 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 KLHDC4Q8TBB5 520 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 JAKMIP1Q96N16 626 aaKnown RBP29.92■■■□□ 2.38
LMBR1-209ENST00000434453 MYL6BP14649 208 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 EPHA10Q5JZY3 1008 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 LARP1Q6PKG0 1096 aaKnown RBP29.92■■■□□ 2.38
LMBR1-209ENST00000434453 TM6SF1Q9BZW5 370 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 NLRP2Q9NX02 1062 aa29.92■■■□□ 2.38
LMBR1-209ENST00000434453 MRC1P22897 1456 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 VPS53Q5VIR6 699 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 LRP10Q7Z4F1 713 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 XAGE3Q8WTP9 111 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 SIL1Q9H173 461 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 C19orf44Q9H6X5 657 aa29.91■■■□□ 2.38
LMBR1-209ENST00000434453 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.91■■■□□ 2.38
LMBR1-209ENST00000434453 STX6O43752 255 aa29.9■■■□□ 2.38
LMBR1-209ENST00000434453 GCKRQ14397 625 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms