RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 MCM6Q14566 821 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 PPP1R14CQ8TAE6 165 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 AFMP43652 599 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 CEP112Q8N8E3 955 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 PPARDQ03181 441 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
SEC16A-206ENST00000431893 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
SEC16A-206ENST00000431893 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
SEC16A-206ENST00000431893 NSD3Q9BZ95 1437 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
SEC16A-206ENST00000431893 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
SEC16A-206ENST00000431893 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
SEC16A-206ENST00000431893 CAPZA3Q96KX2 299 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 STX6O43752 255 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-206ENST00000431893 FBF1Q8TES7 1133 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
SEC16A-206ENST00000431893 ARL1P40616 181 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-206ENST00000431893 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
SEC16A-206ENST00000431893 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
SEC16A-206ENST00000431893 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.31
SEC16A-206ENST00000431893 SPECC1LQ69YQ0 1117 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 MICU3Q86XE3 530 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 TIGD1Q96MW7 591 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.31
SEC16A-206ENST00000431893 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 TBC1D9Q6ZT07 1266 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 GOLIM4O00461 696 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
SEC16A-206ENST00000431893 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 CCDC6Q16204 474 aa13.14□□□□□ -0.31
SEC16A-206ENST00000431893 BMS1Q14692 1282 aaKnown RBP13.14□□□□□ -0.31
SEC16A-206ENST00000431893 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 ZNF165P49910 485 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 CUL5Q93034 780 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
SEC16A-206ENST00000431893 ARID5AQ03989 594 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 GPTP24298 496 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 GSDMDP57764 484 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 ATRIPQ8WXE1 791 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-206ENST00000431893 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
SEC16A-206ENST00000431893 ZNF354CQ86Y25 554 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 CTAGE5O15320 804 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 FERP16591 822 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 HSPA4P34932 840 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 RARSP54136 660 aaKnown RBP13.12□□□□□ -0.31
SEC16A-206ENST00000431893 CALML4Q96GE6 196 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 KIF21BO75037 1637 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 KRT13P13646 458 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 UBASH3AP57075 661 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 CATIPQ7Z7H3 387 aa13.12□□□□□ -0.31
SEC16A-206ENST00000431893 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
SEC16A-206ENST00000431893 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
SEC16A-206ENST00000431893 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 VPS18Q9P253 973 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 BICD1Q96G01 975 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 IKBKGQ9Y6K9 419 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 PHACTR2O75167 634 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-206ENST00000431893 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
SEC16A-206ENST00000431893 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 CFTRP13569 1480 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 N4BP3O15049 544 aa13.11□□□□□ -0.31
SEC16A-206ENST00000431893 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms