RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
DDX56-204ENST00000431640 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
DDX56-204ENST00000431640 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
DDX56-204ENST00000431640 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
DDX56-204ENST00000431640 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
DDX56-204ENST00000431640 ATG3Q9NT62 314 aa15.82■□□□□ 0.12
DDX56-204ENST00000431640 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
DDX56-204ENST00000431640 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
DDX56-204ENST00000431640 DEKP35659 375 aaKnown RBP15.81■□□□□ 0.12
DDX56-204ENST00000431640 SYTL4Q96C24 671 aaPredicted RBP15.81■□□□□ 0.12
DDX56-204ENST00000431640 LRRFIP2Q9Y608 721 aaKnown RBP15.81■□□□□ 0.12
DDX56-204ENST00000431640 LY75O60449 1722 aa15.8■□□□□ 0.12
DDX56-204ENST00000431640 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
DDX56-204ENST00000431640 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
DDX56-204ENST00000431640 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
DDX56-204ENST00000431640 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
DDX56-204ENST00000431640 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
DDX56-204ENST00000431640 PI4KAP2A4QPH2 592 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 APBB1O00213 710 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 PI4KAP1Q8N8J0 262 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
DDX56-204ENST00000431640 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
DDX56-204ENST00000431640 SDSP20132 328 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 PDE1AP54750 535 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 KSR2Q6VAB6 950 aa15.79■□□□□ 0.12
DDX56-204ENST00000431640 COL5A3P25940 1745 aaPredicted RBP15.78■□□□□ 0.12
DDX56-204ENST00000431640 PNMA6EA0A0J9YXQ4 647 aa15.78■□□□□ 0.12
DDX56-204ENST00000431640 HSP90AB4PQ58FF6 505 aa15.78■□□□□ 0.12
DDX56-204ENST00000431640 PTCD1O75127 700 aaKnown RBP15.77■□□□□ 0.11
DDX56-204ENST00000431640 POLA2Q14181 598 aa15.77■□□□□ 0.11
DDX56-204ENST00000431640 OTUD7AQ8TE49 926 aaPredicted RBP15.77■□□□□ 0.11
DDX56-204ENST00000431640 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.11
DDX56-204ENST00000431640 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.11
DDX56-204ENST00000431640 ZNF831Q5JPB2 1677 aa15.77■□□□□ 0.11
DDX56-204ENST00000431640 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
DDX56-204ENST00000431640 REC8O95072 547 aa15.76■□□□□ 0.11
DDX56-204ENST00000431640 SLKQ9H2G2 1235 aaPredicted RBP15.76■□□□□ 0.11
DDX56-204ENST00000431640 STAP2Q9UGK3 403 aa15.76■□□□□ 0.11
DDX56-204ENST00000431640 AOX1Q06278 1338 aa15.76■□□□□ 0.11
DDX56-204ENST00000431640 RREB1Q92766 1687 aa15.76■□□□□ 0.11
DDX56-204ENST00000431640 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 TTC5Q8N0Z6 440 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 MX1P20591 662 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 KIF2CQ99661 725 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
DDX56-204ENST00000431640 SALL3Q9BXA9 1300 aa15.74■□□□□ 0.11
DDX56-204ENST00000431640 ADCY9O60503 1353 aa15.74■□□□□ 0.11
DDX56-204ENST00000431640 BCL11AQ9H165 835 aa15.74■□□□□ 0.11
DDX56-204ENST00000431640 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
DDX56-204ENST00000431640 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
DDX56-204ENST00000431640 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 ERC2O15083 957 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 FRAT2O75474 233 aaPredicted RBP15.73■□□□□ 0.11
DDX56-204ENST00000431640 SURF6O75683 361 aaKnown RBP15.73■□□□□ 0.11
DDX56-204ENST00000431640 NBPF7P0C2Y1 421 aaPredicted RBP15.73■□□□□ 0.11
DDX56-204ENST00000431640 MTX1Q13505 466 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 RABEP1Q15276 862 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 PROSER3Q2NL68 480 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
DDX56-204ENST00000431640 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
DDX56-204ENST00000431640 TRIM37O94972 964 aa15.72■□□□□ 0.11
DDX56-204ENST00000431640 ANXA1P04083 346 aa15.72■□□□□ 0.11
DDX56-204ENST00000431640 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
DDX56-204ENST00000431640 PDIA6Q15084 440 aa15.72■□□□□ 0.11
DDX56-204ENST00000431640 SNRPA1P09661 255 aaKnown RBP15.71■□□□□ 0.11
DDX56-204ENST00000431640 KCNQ4P56696 695 aa15.71■□□□□ 0.11
DDX56-204ENST00000431640 ITPK1Q13572 414 aa15.71■□□□□ 0.11
DDX56-204ENST00000431640 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
DDX56-204ENST00000431640 DNAJC10Q8IXB1 793 aa15.71■□□□□ 0.11
DDX56-204ENST00000431640 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
DDX56-204ENST00000431640 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
DDX56-204ENST00000431640 RHPN1Q8TCX5 695 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
DDX56-204ENST00000431640 MYH14Q7Z406 1995 aaKnown RBP15.7■□□□□ 0.1
DDX56-204ENST00000431640 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 EPB41L2O43491 1005 aaKnown RBP15.7■□□□□ 0.1
DDX56-204ENST00000431640 SIK1P57059 783 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 NEXNQ0ZGT2 675 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 GSE1Q14687 1217 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 ERC1Q8IUD2 1116 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 UTYO14607 1347 aa15.7■□□□□ 0.1
DDX56-204ENST00000431640 RGPD3A6NKT7 1758 aaPredicted RBP15.69■□□□□ 0.1
DDX56-204ENST00000431640 RGPD4Q7Z3J3 1758 aa15.69■□□□□ 0.1
DDX56-204ENST00000431640 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
DDX56-204ENST00000431640 RIC3Q7Z5B4 369 aa15.69■□□□□ 0.1
DDX56-204ENST00000431640 NBPF26B4DH59 902 aa15.68■□□□□ 0.1
DDX56-204ENST00000431640 NBPF14Q5TI25 921 aa15.68■□□□□ 0.1
DDX56-204ENST00000431640 NBPF10Q6P3W6 841 aaKnown RBP15.68■□□□□ 0.1
DDX56-204ENST00000431640 VSIG10Q8N0Z9 540 aa15.68■□□□□ 0.1
DDX56-204ENST00000431640 NBPF15Q8N660 670 aa15.68■□□□□ 0.1
DDX56-204ENST00000431640 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
DDX56-204ENST00000431640 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms