RNA–Protein interactions for RNA: ENST00000431556.6

YIF1A-204, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-204ENST00000431556 NUP98P52948 1817 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 IL16Q14005 1332 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 ELL2O00472 640 aaPredicted RBP20.37■□□□□ 0.85
YIF1A-204ENST00000431556 HOXB7P09629 217 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.854e-6■□□□□ 10.1
YIF1A-204ENST00000431556 MIER1Q8N108 512 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 ZNF652Q9Y2D9 606 aa20.37■□□□□ 0.85
YIF1A-204ENST00000431556 A0A0G2JLW4 131 aa20.36■□□□□ 0.85
YIF1A-204ENST00000431556 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
YIF1A-204ENST00000431556 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
YIF1A-204ENST00000431556 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
YIF1A-204ENST00000431556 ZBTB3Q9H5J0 574 aa20.36■□□□□ 0.85
YIF1A-204ENST00000431556 DPEP1P16444 411 aa20.35■□□□□ 0.85
YIF1A-204ENST00000431556 TGFB2P61812 414 aa20.35■□□□□ 0.85
YIF1A-204ENST00000431556 CCDC24Q8N4L8 307 aa20.35■□□□□ 0.85
YIF1A-204ENST00000431556 TSPYL6Q8N831 410 aa20.35■□□□□ 0.85
YIF1A-204ENST00000431556 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
YIF1A-204ENST00000431556 ANKRD31Q8N7Z5 1873 aa20.35■□□□□ 0.85
YIF1A-204ENST00000431556 GOLGB1Q14789 3259 aaKnown RBP20.35■□□□□ 0.85
YIF1A-204ENST00000431556 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
YIF1A-204ENST00000431556 BRCA1P38398 1863 aaKnown RBP20.34■□□□□ 0.85
YIF1A-204ENST00000431556 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.85
YIF1A-204ENST00000431556 ERVV-1B6SEH8 477 aa20.33■□□□□ 0.85
YIF1A-204ENST00000431556 AIMP1Q12904 312 aaKnown RBP20.33■□□□□ 0.85
YIF1A-204ENST00000431556 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.85
YIF1A-204ENST00000431556 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
YIF1A-204ENST00000431556 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
YIF1A-204ENST00000431556 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
YIF1A-204ENST00000431556 RGL2O15211 777 aa20.32■□□□□ 0.84
YIF1A-204ENST00000431556 CHRNA5P30532 468 aa20.32■□□□□ 0.84
YIF1A-204ENST00000431556 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
YIF1A-204ENST00000431556 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
YIF1A-204ENST00000431556 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
YIF1A-204ENST00000431556 KCNA3P22001 575 aa20.31■□□□□ 0.84
YIF1A-204ENST00000431556 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
YIF1A-204ENST00000431556 DBF4Q9UBU7 674 aaPredicted RBP20.31■□□□□ 0.84
YIF1A-204ENST00000431556 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
YIF1A-204ENST00000431556 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
YIF1A-204ENST00000431556 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
YIF1A-204ENST00000431556 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
YIF1A-204ENST00000431556 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
YIF1A-204ENST00000431556 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
YIF1A-204ENST00000431556 NPHP1O15259 732 aa20.29■□□□□ 0.84
YIF1A-204ENST00000431556 GPTP24298 496 aa20.29■□□□□ 0.84
YIF1A-204ENST00000431556 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
YIF1A-204ENST00000431556 UTRNP46939 3433 aa20.28■□□□□ 0.84
YIF1A-204ENST00000431556 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
YIF1A-204ENST00000431556 BCS1LQ9Y276 419 aa20.28■□□□□ 0.84
YIF1A-204ENST00000431556 ST5P78524 1137 aa20.27■□□□□ 0.84
YIF1A-204ENST00000431556 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
YIF1A-204ENST00000431556 CHD4Q14839 1912 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
YIF1A-204ENST00000431556 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 C2CD5Q86YS7 1000 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 PHAXQ9H814 394 aaKnown RBP20.26■□□□□ 0.83
YIF1A-204ENST00000431556 ARFGEF2Q9Y6D5 1785 aa20.26■□□□□ 0.83
YIF1A-204ENST00000431556 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
YIF1A-204ENST00000431556 EXOSC9Q06265 439 aaKnown RBP20.25■□□□□ 0.83
YIF1A-204ENST00000431556 PIM2Q9P1W9 311 aa20.25■□□□□ 0.83
YIF1A-204ENST00000431556 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
YIF1A-204ENST00000431556 ARFGEF1Q9Y6D6 1849 aa20.25■□□□□ 0.83
YIF1A-204ENST00000431556 ABCC12Q96J65 1359 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 TPTE2Q6XPS3 522 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
YIF1A-204ENST00000431556 PDE6BP35913 854 aa20.23■□□□□ 0.83
YIF1A-204ENST00000431556 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
YIF1A-204ENST00000431556 H0YIN7 160 aa20.22■□□□□ 0.83
YIF1A-204ENST00000431556 NTSR2O95665 410 aa20.22■□□□□ 0.83
YIF1A-204ENST00000431556 YY1P25490 414 aa20.22■□□□□ 0.83
YIF1A-204ENST00000431556 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
YIF1A-204ENST00000431556 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
YIF1A-204ENST00000431556 NYXQ9GZU5 481 aa20.22■□□□□ 0.83
YIF1A-204ENST00000431556 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
YIF1A-204ENST00000431556 GTF2E1P29083 439 aaPredicted RBP20.21■□□□□ 0.83
YIF1A-204ENST00000431556 TCIRG1Q13488 830 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 ERFEQ4G0M1 354 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
YIF1A-204ENST00000431556 VAMP4O75379 141 aa20.2■□□□□ 0.82
YIF1A-204ENST00000431556 NLRP10Q86W26 655 aa20.2■□□□□ 0.82
YIF1A-204ENST00000431556 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
YIF1A-204ENST00000431556 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
YIF1A-204ENST00000431556 CHMP4AQ9BY43 222 aa20.2■□□□□ 0.82
YIF1A-204ENST00000431556 PPP1R42Q7Z4L9 355 aa20.19■□□□□ 0.82
YIF1A-204ENST00000431556 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
YIF1A-204ENST00000431556 SRGNP10124 158 aa20.18■□□□□ 0.82
YIF1A-204ENST00000431556 G2E3Q7L622 706 aa20.18■□□□□ 0.82
YIF1A-204ENST00000431556 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
YIF1A-204ENST00000431556 TTLL6Q8N841 843 aa20.18■□□□□ 0.82
YIF1A-204ENST00000431556 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms