RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 C7orf43Q8WVR3 580 aa29.79■■■□□ 2.36
PTPRA-207ENST00000431048 L3MBTL3Q96JM7 780 aaPredicted RBP29.79■■■□□ 2.36
PTPRA-207ENST00000431048 SLX4Q8IY92 1834 aa29.78■■■□□ 2.36
PTPRA-207ENST00000431048 KIF7Q2M1P5 1343 aa29.78■■■□□ 2.36
PTPRA-207ENST00000431048 CEMIPQ8WUJ3 1361 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 PASKQ96RG2 1323 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 NPHP1O15259 732 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 CLEC4GQ6UXB4 293 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 LDHDQ86WU2 507 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 CNTNAP1P78357 1384 aa29.77■■■□□ 2.36
PTPRA-207ENST00000431048 DZIP3Q86Y13 1208 aaKnown RBP29.76■■■□□ 2.35
PTPRA-207ENST00000431048 SIPA1L3O60292 1781 aaPredicted RBP29.76■■■□□ 2.35
PTPRA-207ENST00000431048 COL3A1P02461 1466 aaPredicted RBP29.75■■■□□ 2.35
PTPRA-207ENST00000431048 CC2D1BQ5T0F9 858 aaKnown RBP29.75■■■□□ 2.35
PTPRA-207ENST00000431048 TAF1DQ9H5J8 278 aaPredicted RBP29.75■■■□□ 2.35
PTPRA-207ENST00000431048 KLRG2A4D1S0 409 aaPredicted RBP29.74■■■□□ 2.35
PTPRA-207ENST00000431048 PRDM10Q9NQV6 1147 aa29.74■■■□□ 2.35
PTPRA-207ENST00000431048 U2SURPO15042 1029 aaKnown RBP29.73■■■□□ 2.35
PTPRA-207ENST00000431048 CCDC93Q567U6 631 aa29.73■■■□□ 2.35
PTPRA-207ENST00000431048 NPC1L1Q9UHC9 1359 aa29.73■■■□□ 2.35
PTPRA-207ENST00000431048 ARFGEF2Q9Y6D5 1785 aa29.72■■■□□ 2.35
PTPRA-207ENST00000431048 BTBD11A6QL63 1104 aa29.72■■■□□ 2.35
PTPRA-207ENST00000431048 RGL2O15211 777 aa29.72■■■□□ 2.35
PTPRA-207ENST00000431048 FOXN1O15353 648 aa29.71■■■□□ 2.35
PTPRA-207ENST00000431048 KCNQ3O43525 872 aa29.71■■■□□ 2.35
PTPRA-207ENST00000431048 NPR1P16066 1061 aa29.71■■■□□ 2.35
PTPRA-207ENST00000431048 USP16Q9Y5T5 823 aa29.71■■■□□ 2.35
PTPRA-207ENST00000431048 SCN4AP35499 1836 aa29.71■■■□□ 2.35
PTPRA-207ENST00000431048 ITGBL1O95965 494 aaPredicted RBP29.7■■■□□ 2.35
PTPRA-207ENST00000431048 NBPF5PQ86XG9 351 aaPredicted RBP29.7■■■□□ 2.35
PTPRA-207ENST00000431048 TMEM88BA6NKF7 163 aa29.69■■■□□ 2.34
PTPRA-207ENST00000431048 FKBP4Q02790 459 aaKnown RBP eCLIP29.69■■■□□ 2.34
PTPRA-207ENST00000431048 ZNF652Q9Y2D9 606 aa29.69■■■□□ 2.34
PTPRA-207ENST00000431048 BCORQ6W2J9 1755 aa29.68■■■□□ 2.34
PTPRA-207ENST00000431048 TPTE2Q6XPS3 522 aa29.67■■■□□ 2.34
PTPRA-207ENST00000431048 CTCFP49711 727 aaPredicted RBP29.66■■■□□ 2.34
PTPRA-207ENST00000431048 VEGFBP49765 207 aa29.66■■■□□ 2.34
PTPRA-207ENST00000431048 RTKN2Q8IZC4 609 aa29.66■■■□□ 2.34
PTPRA-207ENST00000431048 PHACTR3Q96KR7 559 aa29.66■■■□□ 2.34
PTPRA-207ENST00000431048 SNRPA1P09661 255 aaKnown RBP29.65■■■□□ 2.34
PTPRA-207ENST00000431048 HACL1Q9UJ83 578 aa29.65■■■□□ 2.34
PTPRA-207ENST00000431048 AIDAQ96BJ3 306 aa29.64■■■□□ 2.34
PTPRA-207ENST00000431048 ZNF277Q9NRM2 450 aaPredicted RBP29.63■■■□□ 2.33
PTPRA-207ENST00000431048 WBP1LQ9NX94 342 aa29.63■■■□□ 2.33
PTPRA-207ENST00000431048 ZNF541Q9H0D2 1346 aa29.63■■■□□ 2.33
PTPRA-207ENST00000431048 CACNA1SQ13698 1873 aa29.63■■■□□ 2.33
PTPRA-207ENST00000431048 PIP4K2AP48426 406 aaPredicted RBP29.62■■■□□ 2.33
PTPRA-207ENST00000431048 PNMA8AQ86V59 439 aaPredicted RBP29.62■■■□□ 2.33
PTPRA-207ENST00000431048 RSPH6AQ9H0K4 717 aa29.62■■■□□ 2.33
PTPRA-207ENST00000431048 PRAMEF22A3QJZ6 481 aa29.61■■■□□ 2.33
PTPRA-207ENST00000431048 FZD9O00144 591 aa29.61■■■□□ 2.33
PTPRA-207ENST00000431048 ALDH1B1P30837 517 aa29.61■■■□□ 2.33
PTPRA-207ENST00000431048 PRKAR2BP31323 418 aa29.61■■■□□ 2.33
PTPRA-207ENST00000431048 EPHX2P34913 555 aa29.61■■■□□ 2.33
PTPRA-207ENST00000431048 EAPPQ56P03 285 aaPredicted RBP29.61■■■□□ 2.33
PTPRA-207ENST00000431048 NIP7Q9Y221 180 aaKnown RBP eCLIP29.6■■■□□ 2.33
PTPRA-207ENST00000431048 CLEC11AQ9Y240 323 aa29.6■■■□□ 2.33
PTPRA-207ENST00000431048 RASSF10A6NK89 507 aa29.59■■■□□ 2.33
PTPRA-207ENST00000431048 NBPF26B4DH59 902 aa29.58■■■□□ 2.33
PTPRA-207ENST00000431048 IARSP41252 1262 aaKnown RBP29.58■■■□□ 2.33
PTPRA-207ENST00000431048 NBPF10Q6P3W6 841 aaKnown RBP29.58■■■□□ 2.33
PTPRA-207ENST00000431048 SYNE4Q8N205 404 aa29.58■■■□□ 2.33
PTPRA-207ENST00000431048 NBPF15Q8N660 670 aa29.58■■■□□ 2.33
PTPRA-207ENST00000431048 ADAMTSL1Q8N6G6 1762 aa29.57■■■□□ 2.32
PTPRA-207ENST00000431048 OLFM4Q6UX06 510 aa29.57■■■□□ 2.32
PTPRA-207ENST00000431048 CNTROBQ8N137 903 aa29.57■■■□□ 2.32
PTPRA-207ENST00000431048 GPC2Q8N158 579 aa29.57■■■□□ 2.32
PTPRA-207ENST00000431048 DEFB115Q30KQ5 88 aa29.56■■■□□ 2.32
PTPRA-207ENST00000431048 RTF1Q92541 710 aaKnown RBP29.56■■■□□ 2.32
PTPRA-207ENST00000431048 PSMD1Q99460 953 aa29.56■■■□□ 2.32
PTPRA-207ENST00000431048 CCER1Q8TC90 406 aaPredicted RBP29.55■■■□□ 2.32
PTPRA-207ENST00000431048 CFAP53Q96M91 514 aa29.55■■■□□ 2.32
PTPRA-207ENST00000431048 HTATSF1O43719 755 aaKnown RBP29.54■■■□□ 2.32
PTPRA-207ENST00000431048 NUDCQ9Y266 331 aa29.54■■■□□ 2.32
PTPRA-207ENST00000431048 LBX1P52954 281 aa29.53■■■□□ 2.32
PTPRA-207ENST00000431048 CC2D2BQ6DHV5 1058 aa29.53■■■□□ 2.32
PTPRA-207ENST00000431048 SNED1Q8TER0 1413 aa29.53■■■□□ 2.32
PTPRA-207ENST00000431048 RNF123Q5XPI4 1314 aa29.52■■■□□ 2.32
PTPRA-207ENST00000431048 HLFQ16534 295 aa29.52■■■□□ 2.32
PTPRA-207ENST00000431048 CRY2Q49AN0 593 aa29.52■■■□□ 2.32
PTPRA-207ENST00000431048 MAP1SQ66K74 1059 aaPredicted RBP29.52■■■□□ 2.32
PTPRA-207ENST00000431048 MCM10Q7L590 875 aa29.52■■■□□ 2.32
PTPRA-207ENST00000431048 MAP2K1Q02750 393 aaPredicted RBP29.51■■■□□ 2.31
PTPRA-207ENST00000431048 JDP2Q8WYK2 163 aa29.51■■■□□ 2.31
PTPRA-207ENST00000431048 FAM177BA6PVY3 158 aa29.5■■■□□ 2.31
PTPRA-207ENST00000431048 GTF2E1P29083 439 aaPredicted RBP29.5■■■□□ 2.31
PTPRA-207ENST00000431048 WDR33Q9C0J8 1336 aaKnown RBP29.49■■■□□ 2.31
PTPRA-207ENST00000431048 HSPA8P11142 646 aaKnown RBP29.49■■■□□ 2.31
PTPRA-207ENST00000431048 CNGB1Q14028 1251 aaPredicted RBP29.49■■■□□ 2.31
PTPRA-207ENST00000431048 GRIPAP1Q4V328 841 aa29.49■■■□□ 2.31
PTPRA-207ENST00000431048 NYXQ9GZU5 481 aa29.49■■■□□ 2.31
PTPRA-207ENST00000431048 TAF7Q15545 349 aaPredicted RBP29.48■■■□□ 2.31
PTPRA-207ENST00000431048 ERVV-1B6SEH8 477 aa29.47■■■□□ 2.31
PTPRA-207ENST00000431048 EIF6P56537 245 aaKnown RBP29.47■■■□□ 2.31
PTPRA-207ENST00000431048 DDX21Q9NR30 783 aaKnown RBP eCLIP29.47■■■□□ 2.31
PTPRA-207ENST00000431048 U2AF1L5P0DN76 240 aaPredicted RBP29.46■■■□□ 2.31
PTPRA-207ENST00000431048 HOXA10P31260 410 aaPredicted RBP29.46■■■□□ 2.31
PTPRA-207ENST00000431048 U2AF1Q01081 240 aaKnown RBP eCLIP29.46■■■□□ 2.31
PTPRA-207ENST00000431048 DCTN1Q14203 1278 aa29.45■■■□□ 2.31
PTPRA-207ENST00000431048 ABT1Q9ULW3 272 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms