RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
TTC28-202ENST00000431039 ZBED9Q6R2W3 1325 aa21.61■■□□□ 1.05
TTC28-202ENST00000431039 KCNQ3O43525 872 aa21.61■■□□□ 1.05
TTC28-202ENST00000431039 A1BGP04217 495 aa21.61■■□□□ 1.05
TTC28-202ENST00000431039 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
TTC28-202ENST00000431039 ZNF622Q969S3 477 aaKnown RBP eCLIP21.61■■□□□ 1.05
TTC28-202ENST00000431039 FMNL2Q96PY5 1086 aa21.61■■□□□ 1.05
TTC28-202ENST00000431039 ZNF219Q9P2Y4 722 aaPredicted RBP21.61■■□□□ 1.05
TTC28-202ENST00000431039 ZC3H4Q9UPT8 1303 aaKnown RBP21.6■■□□□ 1.05
TTC28-202ENST00000431039 NFKBIEO00221 500 aa21.6■■□□□ 1.05
TTC28-202ENST00000431039 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
TTC28-202ENST00000431039 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
TTC28-202ENST00000431039 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
TTC28-202ENST00000431039 PRR5LQ6MZQ0 368 aa21.59■■□□□ 1.05
TTC28-202ENST00000431039 RRP7AQ9Y3A4 280 aaKnown RBP21.59■■□□□ 1.05
TTC28-202ENST00000431039 SLX4Q8IY92 1834 aa21.58■■□□□ 1.05
TTC28-202ENST00000431039 RIPK4P57078 832 aa21.58■■□□□ 1.05
TTC28-202ENST00000431039 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
TTC28-202ENST00000431039 ARFGEF2Q9Y6D5 1785 aa21.58■■□□□ 1.04
TTC28-202ENST00000431039 GLTPD2A6NH11 291 aa21.57■■□□□ 1.04
TTC28-202ENST00000431039 PDE6BP35913 854 aa21.57■■□□□ 1.04
TTC28-202ENST00000431039 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
TTC28-202ENST00000431039 SMC1BQ8NDV3 1235 aa21.57■■□□□ 1.04
TTC28-202ENST00000431039 BRIP1Q9BX63 1249 aa21.57■■□□□ 1.04
TTC28-202ENST00000431039 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
TTC28-202ENST00000431039 ZNF521Q96K83 1311 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 NPHP1O15259 732 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 C21orf2O43822 256 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 CAMTA2O94983 1202 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 KLRG1Q96E93 195 aa21.56■■□□□ 1.04
TTC28-202ENST00000431039 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
TTC28-202ENST00000431039 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
TTC28-202ENST00000431039 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
TTC28-202ENST00000431039 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
TTC28-202ENST00000431039 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
TTC28-202ENST00000431039 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
TTC28-202ENST00000431039 HTATSF1O43719 755 aaKnown RBP21.54■■□□□ 1.04
TTC28-202ENST00000431039 VEGFAP15692 232 aaPredicted RBP21.54■■□□□ 1.04
TTC28-202ENST00000431039 DZIP3Q86Y13 1208 aaKnown RBP21.54■■□□□ 1.04
TTC28-202ENST00000431039 PDZRN3Q9UPQ7 1066 aa21.54■■□□□ 1.04
TTC28-202ENST00000431039 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
TTC28-202ENST00000431039 MCM10Q7L590 875 aa21.53■■□□□ 1.04
TTC28-202ENST00000431039 ST5P78524 1137 aa21.52■■□□□ 1.04
TTC28-202ENST00000431039 WDR63Q8IWG1 891 aa21.52■■□□□ 1.04
TTC28-202ENST00000431039 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
TTC28-202ENST00000431039 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
TTC28-202ENST00000431039 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
TTC28-202ENST00000431039 ERFEQ4G0M1 354 aa21.5■■□□□ 1.03
TTC28-202ENST00000431039 LAMB4A4D0S4 1761 aa21.5■■□□□ 1.03
TTC28-202ENST00000431039 JMYQ8N9B5 988 aa21.49■■□□□ 1.03
TTC28-202ENST00000431039 CNKSR1Q969H4 720 aa21.49■■□□□ 1.03
TTC28-202ENST00000431039 TAOK3Q9H2K8 898 aa21.49■■□□□ 1.03
TTC28-202ENST00000431039 POTECB2RU33 542 aa21.48■■□□□ 1.03
TTC28-202ENST00000431039 SNRPA1P09661 255 aaKnown RBP21.48■■□□□ 1.03
TTC28-202ENST00000431039 GOLGA2Q08379 1002 aa21.48■■□□□ 1.03
TTC28-202ENST00000431039 STYK1Q6J9G0 422 aa21.48■■□□□ 1.03
TTC28-202ENST00000431039 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
TTC28-202ENST00000431039 PRPF40BQ6NWY9 871 aaKnown RBP21.48■■□□□ 1.03
TTC28-202ENST00000431039 SRGNP10124 158 aa21.47■■□□□ 1.03
TTC28-202ENST00000431039 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
TTC28-202ENST00000431039 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
TTC28-202ENST00000431039 MASTLQ96GX5 879 aa21.47■■□□□ 1.03
TTC28-202ENST00000431039 IL16Q14005 1332 aa21.47■■□□□ 1.03
TTC28-202ENST00000431039 PCNTO95613 3336 aa21.47■■□□□ 1.03
TTC28-202ENST00000431039 ZNF652Q9Y2D9 606 aa21.45■■□□□ 1.02
TTC28-202ENST00000431039 LTBP3Q9NS15 1303 aa21.45■■□□□ 1.02
TTC28-202ENST00000431039 KDM3BQ7LBC6 1761 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 FAM177BA6PVY3 158 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 E9PSI1 815 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
TTC28-202ENST00000431039 CLEC4GQ6UXB4 293 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
TTC28-202ENST00000431039 NUP98P52948 1817 aa21.43■■□□□ 1.02
TTC28-202ENST00000431039 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
TTC28-202ENST00000431039 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
TTC28-202ENST00000431039 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
TTC28-202ENST00000431039 DDNO94850 711 aaPredicted RBP21.42■■□□□ 1.02
TTC28-202ENST00000431039 SOGA3Q5TF21 947 aa21.42■■□□□ 1.02
TTC28-202ENST00000431039 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
TTC28-202ENST00000431039 CDCA7LQ96GN5 454 aa21.42■■□□□ 1.02
TTC28-202ENST00000431039 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
TTC28-202ENST00000431039 COL13A1Q5TAT6 717 aaPredicted RBP21.41■■□□□ 1.02
TTC28-202ENST00000431039 CENPBP07199 599 aaPredicted RBP21.4■■□□□ 1.02
TTC28-202ENST00000431039 NPR1P16066 1061 aa21.4■■□□□ 1.02
TTC28-202ENST00000431039 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
TTC28-202ENST00000431039 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
TTC28-202ENST00000431039 IFT57Q9NWB7 429 aa21.4■■□□□ 1.02
TTC28-202ENST00000431039 SCN4AP35499 1836 aa21.4■■□□□ 1.02
TTC28-202ENST00000431039 ZNF853P0CG23 659 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 POTEIP0CG38 1075 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 POTEJP0CG39 1038 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 HLFQ16534 295 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 CCDC93Q567U6 631 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 TPTE2Q6XPS3 522 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.01
TTC28-202ENST00000431039 GNAI1P63096 354 aa21.38■■□□□ 1.01
TTC28-202ENST00000431039 OLFM4Q6UX06 510 aa21.38■■□□□ 1.01
TTC28-202ENST00000431039 C7orf43Q8WVR3 580 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms