RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 SMC1BQ8NDV3 1235 aa24.87■■□□□ 1.57
AC004540.1-202ENST00000430548 RTF1Q92541 710 aaKnown RBP24.87■■□□□ 1.57
AC004540.1-202ENST00000430548 CLEC4GQ6UXB4 293 aa24.86■■□□□ 1.57
AC004540.1-202ENST00000430548 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
AC004540.1-202ENST00000430548 CCDC24Q8N4L8 307 aa24.86■■□□□ 1.57
AC004540.1-202ENST00000430548 ZNF622Q969S3 477 aaKnown RBP eCLIP24.86■■□□□ 1.57
AC004540.1-202ENST00000430548 SRGNP10124 158 aa24.85■■□□□ 1.57
AC004540.1-202ENST00000430548 PIP4K2AP48426 406 aaPredicted RBP24.85■■□□□ 1.57
AC004540.1-202ENST00000430548 ST5P78524 1137 aa24.85■■□□□ 1.57
AC004540.1-202ENST00000430548 STYK1Q6J9G0 422 aa24.85■■□□□ 1.57
AC004540.1-202ENST00000430548 C21orf2O43822 256 aa24.84■■□□□ 1.57
AC004540.1-202ENST00000430548 KLRG1Q96E93 195 aa24.84■■□□□ 1.57
AC004540.1-202ENST00000430548 SCN4AP35499 1836 aa24.84■■□□□ 1.57
AC004540.1-202ENST00000430548 NBPF26B4DH59 902 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 VEGFAP15692 232 aaPredicted RBP24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 HTRA3P83110 453 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 DCTN1Q14203 1278 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 NBPF10Q6P3W6 841 aaKnown RBP24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 NBPF15Q8N660 670 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 JMYQ8N9B5 988 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 CNKSR1Q969H4 720 aa24.83■■□□□ 1.57
AC004540.1-202ENST00000430548 PRPF40BQ6NWY9 871 aaKnown RBP24.82■■□□□ 1.56
AC004540.1-202ENST00000430548 ZNF652Q9Y2D9 606 aa24.82■■□□□ 1.56
AC004540.1-202ENST00000430548 POTECB2RU33 542 aa24.81■■□□□ 1.56
AC004540.1-202ENST00000430548 MASTLQ96GX5 879 aa24.81■■□□□ 1.56
AC004540.1-202ENST00000430548 TAOK3Q9H2K8 898 aa24.81■■□□□ 1.56
AC004540.1-202ENST00000430548 PCNTO95613 3336 aa24.8■■□□□ 1.56
AC004540.1-202ENST00000430548 KLRG2A4D1S0 409 aaPredicted RBP24.79■■□□□ 1.56
AC004540.1-202ENST00000430548 SOGA3Q5TF21 947 aa24.79■■□□□ 1.56
AC004540.1-202ENST00000430548 NPHP1O15259 732 aa24.78■■□□□ 1.56
AC004540.1-202ENST00000430548 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
AC004540.1-202ENST00000430548 ERFEQ4G0M1 354 aa24.78■■□□□ 1.56
AC004540.1-202ENST00000430548 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
AC004540.1-202ENST00000430548 ZNF219Q9P2Y4 722 aaPredicted RBP24.78■■□□□ 1.56
AC004540.1-202ENST00000430548 C7orf43Q8WVR3 580 aa24.77■■□□□ 1.56
AC004540.1-202ENST00000430548 ADAMTSL1Q8N6G6 1762 aa24.76■■□□□ 1.55
AC004540.1-202ENST00000430548 DPY19L2Q6NUT2 758 aa24.76■■□□□ 1.55
AC004540.1-202ENST00000430548 PLEKHF1Q96S99 279 aa24.76■■□□□ 1.55
AC004540.1-202ENST00000430548 SNED1Q8TER0 1413 aa24.76■■□□□ 1.55
AC004540.1-202ENST00000430548 RIC1Q4ADV7 1423 aa24.75■■□□□ 1.55
AC004540.1-202ENST00000430548 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
AC004540.1-202ENST00000430548 NPR1P16066 1061 aa24.74■■□□□ 1.55
AC004540.1-202ENST00000430548 NIP7Q9Y221 180 aaKnown RBP eCLIP24.74■■□□□ 1.55
AC004540.1-202ENST00000430548 PNISRQ8TF01 805 aaKnown RBP24.73■■□□□ 1.55
AC004540.1-202ENST00000430548 IBTKQ9P2D0 1353 aaPredicted RBP24.72■■□□□ 1.55
AC004540.1-202ENST00000430548 CCDC93Q567U6 631 aa24.72■■□□□ 1.55
AC004540.1-202ENST00000430548 TPTE2Q6XPS3 522 aa24.72■■□□□ 1.55
AC004540.1-202ENST00000430548 ABCC12Q96J65 1359 aa24.71■■□□□ 1.55
AC004540.1-202ENST00000430548 HLFQ16534 295 aa24.71■■□□□ 1.55
AC004540.1-202ENST00000430548 MIS18AQ9NYP9 233 aa24.71■■□□□ 1.55
AC004540.1-202ENST00000430548 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
AC004540.1-202ENST00000430548 NEFMP07197 916 aa24.69■■□□□ 1.54
AC004540.1-202ENST00000430548 EIF4A1P60842 406 aaKnown RBP24.69■■□□□ 1.54
AC004540.1-202ENST00000430548 LAMB2P55268 1798 aa24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 ERVV-1B6SEH8 477 aa24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 DDNO94850 711 aaPredicted RBP24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 FKBP4Q02790 459 aaKnown RBP eCLIP24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 CRY2Q49AN0 593 aa24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 L3MBTL3Q96JM7 780 aaPredicted RBP24.68■■□□□ 1.54
AC004540.1-202ENST00000430548 MAP3K15Q6ZN16 1313 aa24.67■■□□□ 1.54
AC004540.1-202ENST00000430548 ERBB4Q15303 1308 aa24.65■■□□□ 1.54
AC004540.1-202ENST00000430548 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
AC004540.1-202ENST00000430548 CHADLQ6NUI6 762 aa24.64■■□□□ 1.54
AC004540.1-202ENST00000430548 NYXQ9GZU5 481 aa24.64■■□□□ 1.54
AC004540.1-202ENST00000430548 COL4A5P29400 1685 aa24.64■■□□□ 1.53
AC004540.1-202ENST00000430548 UBN2Q6ZU65 1347 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 MAPK8IP3Q9UPT6 1336 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 IQCA1LA6NCM1 817 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 FAM177BA6PVY3 158 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 POTEIP0CG38 1075 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 POTEJP0CG39 1038 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 OLFM4Q6UX06 510 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 RTKN2Q8IZC4 609 aa24.63■■□□□ 1.53
AC004540.1-202ENST00000430548 ZNF541Q9H0D2 1346 aa24.62■■□□□ 1.53
AC004540.1-202ENST00000430548 ALDH1B1P30837 517 aa24.62■■□□□ 1.53
AC004540.1-202ENST00000430548 TTLL7Q6ZT98 887 aa24.62■■□□□ 1.53
AC004540.1-202ENST00000430548 PNNQ9H307 717 aaKnown RBP24.62■■□□□ 1.53
AC004540.1-202ENST00000430548 LTBP1Q14766 1721 aa24.61■■□□□ 1.53
AC004540.1-202ENST00000430548 KIF6Q6ZMV9 814 aa24.61■■□□□ 1.53
AC004540.1-202ENST00000430548 ZNF277Q9NRM2 450 aaPredicted RBP24.61■■□□□ 1.53
AC004540.1-202ENST00000430548 LRP10Q7Z4F1 713 aa24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 NUTM1Q86Y26 1132 aa24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 PSMD1Q99460 953 aa24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 TAF1DQ9H5J8 278 aaPredicted RBP24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 CREBZFQ9NS37 354 aa24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 PASKQ96RG2 1323 aa24.6■■□□□ 1.53
AC004540.1-202ENST00000430548 LDHDQ86WU2 507 aa24.59■■□□□ 1.53
AC004540.1-202ENST00000430548 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
AC004540.1-202ENST00000430548 FZD9O00144 591 aa24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 MYL6BP14649 208 aa24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 GTF2E1P29083 439 aaPredicted RBP24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 COL13A1Q5TAT6 717 aaPredicted RBP24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 ZNF34Q8IZ26 560 aa24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 NGEFQ8N5V2 710 aa24.58■■□□□ 1.53
AC004540.1-202ENST00000430548 NTSR2O95665 410 aa24.57■■□□□ 1.52
AC004540.1-202ENST00000430548 GIGYF2Q6Y7W6 1299 aaKnown RBP24.57■■□□□ 1.52
AC004540.1-202ENST00000430548 ZBTB3Q9H5J0 574 aa24.57■■□□□ 1.52
AC004540.1-202ENST00000430548 CC2D2BQ6DHV5 1058 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms