RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 IFT172Q9UG01 1749 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 PIK3R4Q99570 1358 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 PHF14O94880 888 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
HPS4-205ENST00000429411 ATP8B2P98198 1209 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 PTCH1Q13635 1447 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 PPLO60437 1756 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 MCM2P49736 904 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
HPS4-205ENST00000429411 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.86
HPS4-205ENST00000429411 RIC3Q7Z5B4 369 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 FSD1Q9BTV5 496 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 BOLA2Q9H3K6 86 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 ALKQ9UM73 1620 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 KCNQ3O43525 872 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 HCLS1P14317 486 aaPredicted RBP9.66□□□□□ -0.86
HPS4-205ENST00000429411 CAMK4Q16566 473 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 USP48Q86UV5 1035 aa9.66□□□□□ -0.86
HPS4-205ENST00000429411 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
HPS4-205ENST00000429411 CWF19L2Q2TBE0 894 aaKnown RBP9.66□□□□□ -0.86
HPS4-205ENST00000429411 COL3A1P02461 1466 aaPredicted RBP9.65□□□□□ -0.86
HPS4-205ENST00000429411 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 UQCRHP07919 91 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 IL17REQ8NFR9 667 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 DNAAF4Q8WXU2 420 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 KIF1BPQ96EK5 621 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 PLCD4Q9BRC7 762 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 RXRBP28702 533 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 LRSAM1Q6UWE0 723 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 RUFY2Q8WXA3 655 aa9.65□□□□□ -0.86
HPS4-205ENST00000429411 FAM173BQ6P4H8 233 aa9.65□□□□□ -0.87
HPS4-205ENST00000429411 GIMAP6Q6P9H5 292 aa9.65□□□□□ -0.87
HPS4-205ENST00000429411 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.87
HPS4-205ENST00000429411 USP44Q9H0E7 712 aa9.65□□□□□ -0.87
HPS4-205ENST00000429411 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.87
HPS4-205ENST00000429411 MED14O60244 1454 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 C1orf167Q5SNV9 1468 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 ARHGEF28Q8N1W1 1705 aaKnown RBP9.64□□□□□ -0.87
HPS4-205ENST00000429411 AK2P54819 239 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 RAD21O60216 631 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 GCP02774 474 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 DDIT3P35638 169 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 C17orf53Q8N3J3 647 aaPredicted RBP9.64□□□□□ -0.87
HPS4-205ENST00000429411 KLHDC4Q8TBB5 520 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
HPS4-205ENST00000429411 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.64□□□□□ -0.87
HPS4-205ENST00000429411 JCADQ9P266 1359 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 CPS1P31327 1500 aa9.64□□□□□ -0.87
HPS4-205ENST00000429411 KDM4AO75164 1064 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 HOXC9P31274 260 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 BICD2Q8TD16 824 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 TTC12Q9H892 705 aaPredicted RBP9.63□□□□□ -0.87
HPS4-205ENST00000429411 FLT4P35916 1363 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 CYP46A1Q9Y6A2 500 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
HPS4-205ENST00000429411 H3BQV1 296 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 LARP1BQ659C4 914 aaKnown RBP9.63□□□□□ -0.87
HPS4-205ENST00000429411 NEUROD6Q96NK8 337 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 ATP6V1DQ9Y5K8 247 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
HPS4-205ENST00000429411 RRP9O43818 475 aaKnown RBP9.62□□□□□ -0.87
HPS4-205ENST00000429411 GJB2P29033 226 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
HPS4-205ENST00000429411 ATP7BP35670 1465 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 STX6O43752 255 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 RAB11FIP3O75154 756 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 HSP90AB4PQ58FF6 505 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 CKAP2LQ8IYA6 745 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 IL25Q9H293 177 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 LTBP4Q8N2S1 1624 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
HPS4-205ENST00000429411 TPM2P07951 284 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 NEXNQ0ZGT2 675 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 FAM43BQ6ZT52 329 aaPredicted RBP9.62□□□□□ -0.87
HPS4-205ENST00000429411 PRDM16Q9HAZ2 1276 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 LIMCH1Q9UPQ0 1083 aa9.62□□□□□ -0.87
HPS4-205ENST00000429411 ADGRB2O60241 1585 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 ZNF445P59923 1031 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 TSC1Q92574 1164 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
HPS4-205ENST00000429411 GLRX3O76003 335 aaKnown RBP9.61□□□□□ -0.87
HPS4-205ENST00000429411 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
HPS4-205ENST00000429411 FAM184AQ8NB25 1140 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 LRRC2Q9BYS8 371 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 SYT1P21579 422 aa9.61□□□□□ -0.87
HPS4-205ENST00000429411 CHAF1AQ13111 956 aaPredicted RBP9.61□□□□□ -0.87
HPS4-205ENST00000429411 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms