RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 TFIP11Q9UBB9 837 aaKnown RBP19.48■□□□□ 0.71
RHBDF1-204ENST00000428730 ERBB3P21860 1342 aa19.48■□□□□ 0.71
RHBDF1-204ENST00000428730 JAKMIP1Q96N16 626 aaKnown RBP19.47■□□□□ 0.71
RHBDF1-204ENST00000428730 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
RHBDF1-204ENST00000428730 ZNF446Q9NWS9 450 aa19.47■□□□□ 0.71
RHBDF1-204ENST00000428730 FOXO3O43524 673 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 CAPN2P17655 700 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 ME3Q16798 604 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 ZNF165P49910 485 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 KRT85P78386 507 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 PI4K2BQ8TCG2 481 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 PDRG1Q9NUG6 133 aa19.46■□□□□ 0.71
RHBDF1-204ENST00000428730 TDRD7Q8NHU6 1098 aaKnown RBP19.45■□□□□ 0.7
RHBDF1-204ENST00000428730 IPO4Q8TEX9 1081 aaKnown RBP19.45■□□□□ 0.7
RHBDF1-204ENST00000428730 PIK3C2BO00750 1634 aa19.45■□□□□ 0.7
RHBDF1-204ENST00000428730 PTH1RQ03431 593 aa19.45■□□□□ 0.7
RHBDF1-204ENST00000428730 EIF4A2Q14240 407 aaKnown RBP19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 LARP1BQ659C4 914 aaKnown RBP19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 PRPF40BQ6NWY9 871 aaKnown RBP19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 NR1I2O75469 434 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 LRRC8AQ8IWT6 810 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 COG3Q96JB2 828 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 FAM53CQ9NYF3 392 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 TSPYL4Q9UJ04 414 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 A0A087WWV3 80 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 PTPN14Q15678 1187 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
RHBDF1-204ENST00000428730 SYTL4Q96C24 671 aaPredicted RBP19.43■□□□□ 0.7
RHBDF1-204ENST00000428730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.43■□□□□ 0.7
RHBDF1-204ENST00000428730 LRRN4CLQ8ND94 238 aa19.43■□□□□ 0.7
RHBDF1-204ENST00000428730 ATP7BP35670 1465 aa19.43■□□□□ 0.7
RHBDF1-204ENST00000428730 GOLGA6L4A6NEF3 574 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 GNAI3P08754 354 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 TCEANC2Q96MN5 208 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 SURF6O75683 361 aaKnown RBP19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 FLIIQ13045 1269 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 NYAP1Q6ZVC0 841 aa19.42■□□□□ 0.7
RHBDF1-204ENST00000428730 SKILP12757 684 aa19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 FILIP1Q7Z7B0 1213 aa19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 CLSTN2Q9H4D0 955 aa19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 CRB1P82279 1406 aa19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 SOS1Q07889 1333 aaPredicted RBP19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
RHBDF1-204ENST00000428730 PREX1Q8TCU6 1659 aa19.4■□□□□ 0.7
RHBDF1-204ENST00000428730 AOX1Q06278 1338 aa19.4■□□□□ 0.7
RHBDF1-204ENST00000428730 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
RHBDF1-204ENST00000428730 EPB41L2O43491 1005 aaKnown RBP19.4■□□□□ 0.7
RHBDF1-204ENST00000428730 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
RHBDF1-204ENST00000428730 VPS53Q5VIR6 699 aa19.39■□□□□ 0.7
RHBDF1-204ENST00000428730 KLHL34Q8N239 644 aa19.39■□□□□ 0.7
RHBDF1-204ENST00000428730 BICD2Q8TD16 824 aa19.39■□□□□ 0.7
RHBDF1-204ENST00000428730 ERO1AQ96HE7 468 aa19.39■□□□□ 0.7
RHBDF1-204ENST00000428730 CCDC171Q6TFL3 1326 aa19.39■□□□□ 0.69
RHBDF1-204ENST00000428730 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
RHBDF1-204ENST00000428730 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
RHBDF1-204ENST00000428730 CYP46A1Q9Y6A2 500 aa19.39■□□□□ 0.69
RHBDF1-204ENST00000428730 CPS1P31327 1500 aa19.39■□□□□ 0.69
RHBDF1-204ENST00000428730 ERCC6LQ2NKX8 1250 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 LEO1Q8WVC0 666 aaPredicted RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 STK31Q9BXU1 1019 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 USP44Q9H0E7 712 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 CALCOCO1Q9P1Z2 691 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 ELP1O95163 1332 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 CCDC69A6NI79 296 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 SOX12O15370 315 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 RBM43Q6ZSC3 357 aaKnown RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 NOL10Q9BSC4 688 aaKnown RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 SH2B1Q9NRF2 756 aaPredicted RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 TULP2O00295 520 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 HNRNPH2P55795 449 aaKnown RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 PPP1R42Q7Z4L9 355 aa19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 DDX19AQ9NUU7 478 aaKnown RBP19.38■□□□□ 0.69
RHBDF1-204ENST00000428730 CCZ1BP86790 482 aa19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 CCZ1P86791 482 aaPredicted RBP19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 LARP1Q6PKG0 1096 aaKnown RBP19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 KIF1BPQ96EK5 621 aa19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 SLU7O95391 586 aaKnown RBP19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 UBTFL1P0CB47 393 aaPredicted RBP19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 ZSCAN31Q96LW9 406 aaPredicted RBP19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 MYO5BQ9ULV0 1848 aa19.37■□□□□ 0.69
RHBDF1-204ENST00000428730 HSP90AB2PQ58FF8 381 aa19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 IQCB1Q15051 598 aa19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 CCAR2Q8N163 923 aaKnown RBP19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 CHMP4AQ9BY43 222 aa19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
RHBDF1-204ENST00000428730 GOLGA6L19H0YKK7 550 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 RAB11FIP3O75154 756 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 CYP2C19P33261 490 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 STK3Q13188 491 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 FHOD1Q9Y613 1164 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 SSH3Q8TE77 659 aa19.35■□□□□ 0.69
RHBDF1-204ENST00000428730 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 399.3 ms