RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 BCL11BQ9C0K0 894 aaPredicted RBP18.91■□□□□ 0.62
GINS3-203ENST00000426538 ZBTB1Q9Y2K1 713 aa18.91■□□□□ 0.62
GINS3-203ENST00000426538 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 HMMRO75330 724 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
GINS3-203ENST00000426538 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 CCDC87Q9NVE4 849 aa18.9■□□□□ 0.62
GINS3-203ENST00000426538 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
GINS3-203ENST00000426538 NBPF7P0C2Y1 421 aaPredicted RBP18.89■□□□□ 0.61
GINS3-203ENST00000426538 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
GINS3-203ENST00000426538 ITPK1Q13572 414 aa18.89■□□□□ 0.61
GINS3-203ENST00000426538 GCC1Q96CN9 775 aa18.89■□□□□ 0.61
GINS3-203ENST00000426538 TJP1Q07157 1748 aa18.89■□□□□ 0.61
GINS3-203ENST00000426538 SMC5Q8IY18 1101 aa18.88■□□□□ 0.61
GINS3-203ENST00000426538 LRRFIP2Q9Y608 721 aaKnown RBP18.88■□□□□ 0.61
GINS3-203ENST00000426538 BTAF1O14981 1849 aa18.88■□□□□ 0.61
GINS3-203ENST00000426538 GRM8O00222 908 aa18.88■□□□□ 0.61
GINS3-203ENST00000426538 ATP5J2-PTCD1G3V325 749 aa18.87■□□□□ 0.61
GINS3-203ENST00000426538 GCKRQ14397 625 aa18.87■□□□□ 0.61
GINS3-203ENST00000426538 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
GINS3-203ENST00000426538 SBF2Q86WG5 1849 aa18.87■□□□□ 0.61
GINS3-203ENST00000426538 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
GINS3-203ENST00000426538 ATP8B2P98198 1209 aa18.86■□□□□ 0.61
GINS3-203ENST00000426538 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
GINS3-203ENST00000426538 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
GINS3-203ENST00000426538 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
GINS3-203ENST00000426538 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
GINS3-203ENST00000426538 MAP3K15Q6ZN16 1313 aa18.85■□□□□ 0.61
GINS3-203ENST00000426538 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
GINS3-203ENST00000426538 ZNF831Q5JPB2 1677 aa18.85■□□□□ 0.61
GINS3-203ENST00000426538 DZIP3Q86Y13 1208 aaKnown RBP18.85■□□□□ 0.61
GINS3-203ENST00000426538 CICQ96RK0 1608 aaPredicted RBP18.84■□□□□ 0.61
GINS3-203ENST00000426538 UTYO14607 1347 aa18.84■□□□□ 0.61
GINS3-203ENST00000426538 TRIM37O94972 964 aa18.84■□□□□ 0.61
GINS3-203ENST00000426538 RGS3P49796 1198 aa18.84■□□□□ 0.61
GINS3-203ENST00000426538 TCIRG1Q13488 830 aa18.84■□□□□ 0.61
GINS3-203ENST00000426538 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
GINS3-203ENST00000426538 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
GINS3-203ENST00000426538 KCNQ4P56696 695 aa18.83■□□□□ 0.61
GINS3-203ENST00000426538 HSP90AB3PQ58FF7 597 aa18.83■□□□□ 0.61
GINS3-203ENST00000426538 CCDC191Q8NCU4 936 aa18.83■□□□□ 0.61
GINS3-203ENST00000426538 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.61
GINS3-203ENST00000426538 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.61
GINS3-203ENST00000426538 A0A087WZG4 1122 aa18.83■□□□□ 0.6
GINS3-203ENST00000426538 ERVV-1B6SEH8 477 aa18.83■□□□□ 0.6
GINS3-203ENST00000426538 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
GINS3-203ENST00000426538 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.6
GINS3-203ENST00000426538 SKAP1Q86WV1 359 aa18.83■□□□□ 0.6
GINS3-203ENST00000426538 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
GINS3-203ENST00000426538 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
GINS3-203ENST00000426538 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
GINS3-203ENST00000426538 PNMA6EA0A0J9YXQ4 647 aa18.81■□□□□ 0.6
GINS3-203ENST00000426538 NUCB1Q02818 461 aa18.81■□□□□ 0.6
GINS3-203ENST00000426538 RC3H1Q5TC82 1133 aaKnown RBP18.81■□□□□ 0.6
GINS3-203ENST00000426538 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
GINS3-203ENST00000426538 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
GINS3-203ENST00000426538 SRGAP3O43295 1099 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 TRIM28Q13263 835 aaKnown RBP18.8■□□□□ 0.6
GINS3-203ENST00000426538 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
GINS3-203ENST00000426538 HLFQ16534 295 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 UBE3BQ7Z3V4 1068 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 SUCLG2Q96I99 432 aa18.8■□□□□ 0.6
GINS3-203ENST00000426538 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
GINS3-203ENST00000426538 COL5A3P25940 1745 aaPredicted RBP18.79■□□□□ 0.6
GINS3-203ENST00000426538 MYH14Q7Z406 1995 aaKnown RBP18.79■□□□□ 0.6
GINS3-203ENST00000426538 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
GINS3-203ENST00000426538 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
GINS3-203ENST00000426538 H7C1W4 665 aa18.77■□□□□ 0.6
GINS3-203ENST00000426538 MTX1Q13505 466 aa18.77■□□□□ 0.6
GINS3-203ENST00000426538 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.6
GINS3-203ENST00000426538 BICC1Q9H694 974 aaKnown RBP18.77■□□□□ 0.6
GINS3-203ENST00000426538 COL15A1P39059 1388 aa18.77■□□□□ 0.6
GINS3-203ENST00000426538 LY75O60449 1722 aa18.77■□□□□ 0.6
GINS3-203ENST00000426538 RREB1Q92766 1687 aa18.77■□□□□ 0.6
GINS3-203ENST00000426538 RPS6KA4O75676 772 aa18.77■□□□□ 0.59
GINS3-203ENST00000426538 POLA2Q14181 598 aa18.77■□□□□ 0.59
GINS3-203ENST00000426538 SLC27A3Q5K4L6 730 aa18.77■□□□□ 0.59
GINS3-203ENST00000426538 GNPATO15228 680 aa18.76■□□□□ 0.59
GINS3-203ENST00000426538 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
GINS3-203ENST00000426538 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
GINS3-203ENST00000426538 APBB1O00213 710 aa18.75■□□□□ 0.59
GINS3-203ENST00000426538 GPTP24298 496 aa18.75■□□□□ 0.59
GINS3-203ENST00000426538 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
GINS3-203ENST00000426538 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
GINS3-203ENST00000426538 ZNF652Q9Y2D9 606 aa18.75■□□□□ 0.59
GINS3-203ENST00000426538 SURF6O75683 361 aaKnown RBP18.74■□□□□ 0.59
GINS3-203ENST00000426538 CAMTA2O94983 1202 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 CASP7P55210 303 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 NLRP10Q86W26 655 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 EP400Q96L91 3159 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 HSP90AB4PQ58FF6 505 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
GINS3-203ENST00000426538 AK7Q96M32 723 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 LRRC4BQ9NT99 713 aa18.74■□□□□ 0.59
GINS3-203ENST00000426538 APBA3O96018 575 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms