RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
VEGFB-202ENST00000426086 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
VEGFB-202ENST00000426086 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
VEGFB-202ENST00000426086 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
VEGFB-202ENST00000426086 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
VEGFB-202ENST00000426086 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
VEGFB-202ENST00000426086 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
VEGFB-202ENST00000426086 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 VEGFBP49765 207 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 TEFQ10587 303 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 L3MBTL3Q96JM7 780 aaPredicted RBP18.34■□□□□ 0.53
VEGFB-202ENST00000426086 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
VEGFB-202ENST00000426086 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
VEGFB-202ENST00000426086 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
VEGFB-202ENST00000426086 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
VEGFB-202ENST00000426086 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.52
VEGFB-202ENST00000426086 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
VEGFB-202ENST00000426086 NPHP1O15259 732 aa18.32■□□□□ 0.52
VEGFB-202ENST00000426086 ST5P78524 1137 aa18.32■□□□□ 0.52
VEGFB-202ENST00000426086 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
VEGFB-202ENST00000426086 SCN4AP35499 1836 aa18.32■□□□□ 0.52
VEGFB-202ENST00000426086 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
VEGFB-202ENST00000426086 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
VEGFB-202ENST00000426086 PRDM10Q9NQV6 1147 aa18.31■□□□□ 0.52
VEGFB-202ENST00000426086 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
VEGFB-202ENST00000426086 IQCA1LA6NCM1 817 aa18.3■□□□□ 0.52
VEGFB-202ENST00000426086 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
VEGFB-202ENST00000426086 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
VEGFB-202ENST00000426086 TMEM88BA6NKF7 163 aa18.29■□□□□ 0.52
VEGFB-202ENST00000426086 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
VEGFB-202ENST00000426086 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
VEGFB-202ENST00000426086 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
VEGFB-202ENST00000426086 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
VEGFB-202ENST00000426086 LBX1P52954 281 aa18.28■□□□□ 0.52
VEGFB-202ENST00000426086 FKBP4Q02790 459 aaKnown RBP eCLIP18.28■□□□□ 0.52
VEGFB-202ENST00000426086 NBPF5PQ86XG9 351 aaPredicted RBP18.28■□□□□ 0.52
VEGFB-202ENST00000426086 WBP1LQ9NX94 342 aa18.28■□□□□ 0.52
VEGFB-202ENST00000426086 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
VEGFB-202ENST00000426086 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.52
VEGFB-202ENST00000426086 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
VEGFB-202ENST00000426086 CTCFP49711 727 aaPredicted RBP18.27■□□□□ 0.52
VEGFB-202ENST00000426086 MAP1SQ66K74 1059 aaPredicted RBP18.27■□□□□ 0.52
VEGFB-202ENST00000426086 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 NPR1P16066 1061 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 EPHX2P34913 555 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
VEGFB-202ENST00000426086 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 HACL1Q9UJ83 578 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
VEGFB-202ENST00000426086 COL4A5P29400 1685 aa18.25■□□□□ 0.51
VEGFB-202ENST00000426086 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
VEGFB-202ENST00000426086 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.51
VEGFB-202ENST00000426086 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
VEGFB-202ENST00000426086 SLC51AQ86UW1 340 aa18.25■□□□□ 0.51
VEGFB-202ENST00000426086 LTBP1Q14766 1721 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 FZD9O00144 591 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 HSPA8P11142 646 aaKnown RBP18.24■□□□□ 0.51
VEGFB-202ENST00000426086 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 AIDAQ96BJ3 306 aa18.24■□□□□ 0.51
VEGFB-202ENST00000426086 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
VEGFB-202ENST00000426086 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
VEGFB-202ENST00000426086 HLFQ16534 295 aa18.23■□□□□ 0.51
VEGFB-202ENST00000426086 SYNE4Q8N205 404 aa18.23■□□□□ 0.51
VEGFB-202ENST00000426086 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
VEGFB-202ENST00000426086 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
VEGFB-202ENST00000426086 DEFB115Q30KQ5 88 aa18.22■□□□□ 0.51
VEGFB-202ENST00000426086 MCM10Q7L590 875 aa18.22■□□□□ 0.51
VEGFB-202ENST00000426086 DCTN1Q14203 1278 aa18.21■□□□□ 0.51
VEGFB-202ENST00000426086 TPTE2Q6XPS3 522 aa18.21■□□□□ 0.51
VEGFB-202ENST00000426086 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
VEGFB-202ENST00000426086 ABCC12Q96J65 1359 aa18.2■□□□□ 0.5
VEGFB-202ENST00000426086 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
VEGFB-202ENST00000426086 RTKN2Q8IZC4 609 aa18.2■□□□□ 0.5
VEGFB-202ENST00000426086 ABHD8Q96I13 439 aa18.2■□□□□ 0.5
VEGFB-202ENST00000426086 ZNF652Q9Y2D9 606 aa18.2■□□□□ 0.5
VEGFB-202ENST00000426086 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
VEGFB-202ENST00000426086 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
VEGFB-202ENST00000426086 NUTM1Q86Y26 1132 aa18.18■□□□□ 0.5
VEGFB-202ENST00000426086 GPC2Q8N158 579 aa18.18■□□□□ 0.5
VEGFB-202ENST00000426086 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
VEGFB-202ENST00000426086 FAM161AQ3B820 660 aa18.17■□□□□ 0.5
VEGFB-202ENST00000426086 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
VEGFB-202ENST00000426086 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 ALDH1B1P30837 517 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 EPS15P42566 896 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 SCNN1DP51172 638 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 CRY2Q49AN0 593 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 PSMD1Q99460 953 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
VEGFB-202ENST00000426086 TRAF5O00463 557 aa18.15■□□□□ 0.5
VEGFB-202ENST00000426086 SLC34A2O95436 690 aa18.15■□□□□ 0.5
VEGFB-202ENST00000426086 RGL2O15211 777 aa18.14■□□□□ 0.49
VEGFB-202ENST00000426086 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
VEGFB-202ENST00000426086 CST9Q5W186 159 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms