RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MAP3K15Q6ZN16 1313 aa31.46■■■□□ 2.63
VEGFA-209ENST00000425836 ERVV-1B6SEH8 477 aa31.46■■■□□ 2.63
VEGFA-209ENST00000425836 POLD1P28340 1107 aa31.46■■■□□ 2.63
VEGFA-209ENST00000425836 SLC4A2P04920 1241 aa31.45■■■□□ 2.63
VEGFA-209ENST00000425836 HLFQ16534 295 aa31.45■■■□□ 2.63
VEGFA-209ENST00000425836 MMP10P09238 476 aa31.44■■■□□ 2.62
VEGFA-209ENST00000425836 TM4SF1P30408 202 aa31.44■■■□□ 2.62
VEGFA-209ENST00000425836 CLEC4GQ6UXB4 293 aa31.44■■■□□ 2.62
VEGFA-209ENST00000425836 ZBTB3Q9H5J0 574 aa31.44■■■□□ 2.62
VEGFA-209ENST00000425836 RGL2O15211 777 aa31.43■■■□□ 2.62
VEGFA-209ENST00000425836 NFIXQ14938 502 aa31.43■■■□□ 2.62
VEGFA-209ENST00000425836 YTHDC1Q96MU7 727 aaKnown RBP31.43■■■□□ 2.62
VEGFA-209ENST00000425836 TBC1D9BQ66K14 1250 aa31.42■■■□□ 2.62
VEGFA-209ENST00000425836 ZNF652Q9Y2D9 606 aa31.42■■■□□ 2.62
VEGFA-209ENST00000425836 CT47B1P0C2W7 299 aaPredicted RBP31.41■■■□□ 2.62
VEGFA-209ENST00000425836 G2E3Q7L622 706 aa31.4■■■□□ 2.62
VEGFA-209ENST00000425836 COL24A1Q17RW2 1714 aa31.4■■■□□ 2.62
VEGFA-209ENST00000425836 DDR1Q08345 913 aa31.39■■■□□ 2.62
VEGFA-209ENST00000425836 BICDL1Q6ZP65 573 aa31.39■■■□□ 2.62
VEGFA-209ENST00000425836 ANKRD13DQ6ZTN6 518 aa31.39■■■□□ 2.62
VEGFA-209ENST00000425836 ZNF428Q96B54 188 aa31.39■■■□□ 2.62
VEGFA-209ENST00000425836 SCN7AQ01118 1682 aa31.39■■■□□ 2.62
VEGFA-209ENST00000425836 GIGYF2Q6Y7W6 1299 aaKnown RBP31.39■■■□□ 2.61
VEGFA-209ENST00000425836 PLBD2Q8NHP8 589 aa31.38■■■□□ 2.61
VEGFA-209ENST00000425836 POLRMTO00411 1230 aaKnown RBP31.37■■■□□ 2.61
VEGFA-209ENST00000425836 PARP3Q9Y6F1 533 aa31.37■■■□□ 2.61
VEGFA-209ENST00000425836 SSH1Q8WYL5 1049 aa31.36■■■□□ 2.61
VEGFA-209ENST00000425836 SRCAPQ6ZRS2 3230 aa31.35■■■□□ 2.61
VEGFA-209ENST00000425836 SETDB2Q96T68 719 aa31.35■■■□□ 2.61
VEGFA-209ENST00000425836 PPP1R1BQ9UD71 204 aaPredicted RBP31.35■■■□□ 2.61
VEGFA-209ENST00000425836 LRP5O75197 1615 aa31.35■■■□□ 2.61
VEGFA-209ENST00000425836 BCORQ6W2J9 1755 aa31.35■■■□□ 2.61
VEGFA-209ENST00000425836 FLIIQ13045 1269 aa31.34■■■□□ 2.61
VEGFA-209ENST00000425836 NIP7Q9Y221 180 aaKnown RBP eCLIP31.34■■■□□ 2.61
VEGFA-209ENST00000425836 ALDH1L2Q3SY69 923 aa31.34■■■□□ 2.61
VEGFA-209ENST00000425836 MRPL50Q8N5N7 158 aaKnown RBP31.34■■■□□ 2.61
VEGFA-209ENST00000425836 DDX58O95786 925 aaKnown RBP31.33■■■□□ 2.61
VEGFA-209ENST00000425836 RIC3Q7Z5B4 369 aa31.33■■■□□ 2.61
VEGFA-209ENST00000425836 SERPINB2P05120 415 aa31.31■■■□□ 2.6
VEGFA-209ENST00000425836 TCIRG1Q13488 830 aa31.31■■■□□ 2.6
VEGFA-209ENST00000425836 ZNF34Q8IZ26 560 aa31.31■■■□□ 2.6
VEGFA-209ENST00000425836 BCL2L13Q9BXK5 485 aa31.31■■■□□ 2.6
VEGFA-209ENST00000425836 ATP10DQ9P241 1426 aa31.31■■■□□ 2.6
VEGFA-209ENST00000425836 GPTP24298 496 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 RARSP54136 660 aaKnown RBP31.3■■■□□ 2.6
VEGFA-209ENST00000425836 KSR2Q6VAB6 950 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 CARMIL3Q8ND23 1372 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 PI4KAP2A4QPH2 592 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 HSP90AB3PQ58FF7 597 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 PI4KAP1Q8N8J0 262 aa31.3■■■□□ 2.6
VEGFA-209ENST00000425836 FKBP5Q13451 457 aaPredicted RBP31.29■■■□□ 2.6
VEGFA-209ENST00000425836 SMC4Q9NTJ3 1288 aa31.29■■■□□ 2.6
VEGFA-209ENST00000425836 MAP3K2Q9Y2U5 619 aa31.28■■■□□ 2.6
VEGFA-209ENST00000425836 UBN2Q6ZU65 1347 aa31.28■■■□□ 2.6
VEGFA-209ENST00000425836 ADCY9O60503 1353 aa31.27■■■□□ 2.6
VEGFA-209ENST00000425836 FHDC1Q9C0D6 1143 aaPredicted RBP31.26■■■□□ 2.6
VEGFA-209ENST00000425836 METTL22Q9BUU2 404 aaPredicted RBP31.26■■■□□ 2.59
VEGFA-209ENST00000425836 ISCA1Q9BUE6 129 aa31.25■■■□□ 2.59
VEGFA-209ENST00000425836 FAM177BA6PVY3 158 aa31.24■■■□□ 2.59
VEGFA-209ENST00000425836 SUSD4Q5VX71 490 aa31.24■■■□□ 2.59
VEGFA-209ENST00000425836 NBPF5PQ86XG9 351 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-209ENST00000425836 KLHL34Q8N239 644 aa31.24■■■□□ 2.59
VEGFA-209ENST00000425836 ATP5J2-PTCD1G3V325 749 aa31.23■■■□□ 2.59
VEGFA-209ENST00000425836 BRPF1P55201 1214 aaPredicted RBP31.23■■■□□ 2.59
VEGFA-209ENST00000425836 PARP10Q53GL7 1025 aa31.23■■■□□ 2.59
VEGFA-209ENST00000425836 NLRP10Q86W26 655 aa31.23■■■□□ 2.59
VEGFA-209ENST00000425836 MYD88Q99836 296 aa31.23■■■□□ 2.59
VEGFA-209ENST00000425836 CD2APQ9Y5K6 639 aa31.23■■■□□ 2.59
VEGFA-209ENST00000425836 PRR5LQ6MZQ0 368 aa31.22■■■□□ 2.59
VEGFA-209ENST00000425836 NUP98P52948 1817 aa31.22■■■□□ 2.59
VEGFA-209ENST00000425836 TRIM28Q13263 835 aaKnown RBP31.22■■■□□ 2.59
VEGFA-209ENST00000425836 TPTE2Q6XPS3 522 aa31.22■■■□□ 2.59
VEGFA-209ENST00000425836 CNBD1Q8NA66 436 aa31.22■■■□□ 2.59
VEGFA-209ENST00000425836 DNAAF4Q8WXU2 420 aa31.21■■■□□ 2.59
VEGFA-209ENST00000425836 SYT17Q9BSW7 474 aa31.21■■■□□ 2.59
VEGFA-209ENST00000425836 C10orf71Q711Q0 1435 aa31.2■■■□□ 2.59
VEGFA-209ENST00000425836 F6X3S4 739 aa31.2■■■□□ 2.58
VEGFA-209ENST00000425836 CCDC24Q8N4L8 307 aa31.2■■■□□ 2.58
VEGFA-209ENST00000425836 BCAR3O75815 825 aa31.19■■■□□ 2.58
VEGFA-209ENST00000425836 PPP1R42Q7Z4L9 355 aa31.19■■■□□ 2.58
VEGFA-209ENST00000425836 NYXQ9GZU5 481 aa31.19■■■□□ 2.58
VEGFA-209ENST00000425836 PTPRCP08575 1304 aa31.19■■■□□ 2.58
VEGFA-209ENST00000425836 NPHP1O15259 732 aa31.18■■■□□ 2.58
VEGFA-209ENST00000425836 NOB1Q9ULX3 412 aaKnown RBP31.18■■■□□ 2.58
VEGFA-209ENST00000425836 NTSR2O95665 410 aa31.17■■■□□ 2.58
VEGFA-209ENST00000425836 IGKV5-2P06315 115 aa31.17■■■□□ 2.58
VEGFA-209ENST00000425836 UTP14AQ9BVJ6 771 aaKnown RBP31.17■■■□□ 2.58
VEGFA-209ENST00000425836 CACNA1FO60840 1977 aa31.17■■■□□ 2.58
VEGFA-209ENST00000425836 NRXN2Q9P2S2 1712 aa31.17■■■□□ 2.58
VEGFA-209ENST00000425836 IBTKQ9P2D0 1353 aaPredicted RBP31.17■■■□□ 2.58
VEGFA-209ENST00000425836 NEXNQ0ZGT2 675 aa31.17■■■□□ 2.58
VEGFA-209ENST00000425836 ARFGEF2Q9Y6D5 1785 aa31.16■■■□□ 2.58
VEGFA-209ENST00000425836 ST5P78524 1137 aa31.16■■■□□ 2.58
VEGFA-209ENST00000425836 NUTM1Q86Y26 1132 aa31.16■■■□□ 2.58
VEGFA-209ENST00000425836 GTF2E1P29083 439 aaPredicted RBP31.15■■■□□ 2.58
VEGFA-209ENST00000425836 NLGN2Q8NFZ4 835 aa31.15■■■□□ 2.58
VEGFA-209ENST00000425836 ERFEQ4G0M1 354 aa31.14■■■□□ 2.58
VEGFA-209ENST00000425836 CCDC191Q8NCU4 936 aa31.14■■■□□ 2.58
VEGFA-209ENST00000425836 BRIP1Q9BX63 1249 aa31.14■■■□□ 2.58
VEGFA-209ENST00000425836 TRMT112Q9UI30 125 aaKnown RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms