RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 GCKRQ14397 625 aa18.9■□□□□ 0.62
ACTB-204ENST00000425660 AFF2P51816 1311 aa18.9■□□□□ 0.62
ACTB-204ENST00000425660 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
ACTB-204ENST00000425660 MYD88Q99836 296 aa18.9■□□□□ 0.62
ACTB-204ENST00000425660 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
ACTB-204ENST00000425660 COL15A1P39059 1388 aa18.88■□□□□ 0.61
ACTB-204ENST00000425660 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
ACTB-204ENST00000425660 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
ACTB-204ENST00000425660 CICQ96RK0 1608 aaPredicted RBP18.88■□□□□ 0.61
ACTB-204ENST00000425660 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
ACTB-204ENST00000425660 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
ACTB-204ENST00000425660 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
ACTB-204ENST00000425660 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
ACTB-204ENST00000425660 PLEKHM2Q8IWE5 1019 aa18.87■□□□□ 0.61
ACTB-204ENST00000425660 ZBTB47Q9UFB7 747 aaPredicted RBP18.87■□□□□ 0.61
ACTB-204ENST00000425660 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
ACTB-204ENST00000425660 TJP1Q07157 1748 aa18.86■□□□□ 0.61
ACTB-204ENST00000425660 ACSBG1Q96GR2 724 aa18.86■□□□□ 0.61
ACTB-204ENST00000425660 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
ACTB-204ENST00000425660 GJD4Q96KN9 370 aaPredicted RBP18.86■□□□□ 0.61
ACTB-204ENST00000425660 ATRNO75882 1429 aa18.85■□□□□ 0.61
ACTB-204ENST00000425660 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
ACTB-204ENST00000425660 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
ACTB-204ENST00000425660 RAB11FIP3O75154 756 aa18.84■□□□□ 0.61
ACTB-204ENST00000425660 NOP58Q9Y2X3 529 aaKnown RBP18.84■□□□□ 0.61
ACTB-204ENST00000425660 SMARCA5O60264 1052 aaPredicted RBP18.83■□□□□ 0.6
ACTB-204ENST00000425660 CASP7P55210 303 aa18.83■□□□□ 0.6
ACTB-204ENST00000425660 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.6
ACTB-204ENST00000425660 OSBPL3Q9H4L5 887 aa18.83■□□□□ 0.6
ACTB-204ENST00000425660 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.6
ACTB-204ENST00000425660 PALLDQ8WX93 1383 aa18.83■□□□□ 0.6
ACTB-204ENST00000425660 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 SIK1P57059 783 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 HSP90AB4PQ58FF6 505 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
ACTB-204ENST00000425660 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
ACTB-204ENST00000425660 KAT6BQ8WYB5 2073 aa18.82■□□□□ 0.6
ACTB-204ENST00000425660 ZNF831Q5JPB2 1677 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 APBB1O00213 710 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 KCNQ2O43526 872 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 ANP32AP39687 249 aaKnown RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 TRIM28Q13263 835 aaKnown RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 CCDC191Q8NCU4 936 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 H7C1W4 665 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
ACTB-204ENST00000425660 RGS17Q9UGC6 210 aaPredicted RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 AFDNP55196 1824 aaKnown RBP18.81■□□□□ 0.6
ACTB-204ENST00000425660 A0A087WZG4 1122 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 SEC24BO95487 1268 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 TCIRG1Q13488 830 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 TTC22Q5TAA0 569 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 CWC25Q9NXE8 425 aaPredicted RBP18.8■□□□□ 0.6
ACTB-204ENST00000425660 MAP3K15Q6ZN16 1313 aa18.8■□□□□ 0.6
ACTB-204ENST00000425660 RREB1Q92766 1687 aa18.79■□□□□ 0.6
ACTB-204ENST00000425660 GSPT1P15170 499 aaKnown RBP18.79■□□□□ 0.6
ACTB-204ENST00000425660 UBE3BQ7Z3V4 1068 aa18.79■□□□□ 0.6
ACTB-204ENST00000425660 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
ACTB-204ENST00000425660 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
ACTB-204ENST00000425660 A0A0G2JS52 829 aa18.78■□□□□ 0.6
ACTB-204ENST00000425660 MYT1Q01538 1121 aa18.78■□□□□ 0.6
ACTB-204ENST00000425660 EPHA10Q5JZY3 1008 aa18.78■□□□□ 0.6
ACTB-204ENST00000425660 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
ACTB-204ENST00000425660 GIGYF2Q6Y7W6 1299 aaKnown RBP18.78■□□□□ 0.6
ACTB-204ENST00000425660 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
ACTB-204ENST00000425660 PDE1AP54750 535 aa18.77■□□□□ 0.6
ACTB-204ENST00000425660 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
ACTB-204ENST00000425660 ERVV-1B6SEH8 477 aa18.77■□□□□ 0.59
ACTB-204ENST00000425660 ITPK1Q13572 414 aa18.77■□□□□ 0.59
ACTB-204ENST00000425660 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.59
ACTB-204ENST00000425660 STAP2Q9UGK3 403 aa18.77■□□□□ 0.59
ACTB-204ENST00000425660 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
ACTB-204ENST00000425660 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
ACTB-204ENST00000425660 ZNF330Q9Y3S2 320 aaPredicted RBP18.76■□□□□ 0.59
ACTB-204ENST00000425660 MX1P20591 662 aa18.75■□□□□ 0.59
ACTB-204ENST00000425660 HSP90AB3PQ58FF7 597 aa18.75■□□□□ 0.59
ACTB-204ENST00000425660 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
ACTB-204ENST00000425660 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
ACTB-204ENST00000425660 AOX1Q06278 1338 aa18.74■□□□□ 0.59
ACTB-204ENST00000425660 COL5A3P25940 1745 aaPredicted RBP18.74■□□□□ 0.59
ACTB-204ENST00000425660 FOXO4P98177 505 aa18.74■□□□□ 0.59
ACTB-204ENST00000425660 POTEAQ6S8J7 498 aa18.74■□□□□ 0.59
ACTB-204ENST00000425660 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
ACTB-204ENST00000425660 COPRSQ9NQ92 184 aa18.74■□□□□ 0.59
ACTB-204ENST00000425660 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
ACTB-204ENST00000425660 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
ACTB-204ENST00000425660 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
ACTB-204ENST00000425660 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
ACTB-204ENST00000425660 PA2G4Q9UQ80 394 aaKnown RBP18.73■□□□□ 0.59
ACTB-204ENST00000425660 HLFQ16534 295 aa18.72■□□□□ 0.59
ACTB-204ENST00000425660 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms