RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 HSP90AB4PQ58FF6 505 aa14.07□□□□□ -0.16
UBR4-207ENST00000425413 AK9Q5TCS8 1911 aa14.07□□□□□ -0.16
UBR4-207ENST00000425413 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
UBR4-207ENST00000425413 EPHA10Q5JZY3 1008 aa14.06□□□□□ -0.16
UBR4-207ENST00000425413 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
UBR4-207ENST00000425413 TLR7Q9NYK1 1049 aaKnown RBP14.06□□□□□ -0.16
UBR4-207ENST00000425413 CACNA1FO60840 1977 aa14.06□□□□□ -0.16
UBR4-207ENST00000425413 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBR4-207ENST00000425413 G3BP1Q13283 466 aaKnown RBP eCLIP14.05□□□□□ -0.161e-7■□□□□ 9.6
UBR4-207ENST00000425413 LARP1Q6PKG0 1096 aaKnown RBP14.05□□□□□ -0.16
UBR4-207ENST00000425413 DCAF5Q96JK2 942 aa14.05□□□□□ -0.16
UBR4-207ENST00000425413 SNRPA1P09661 255 aaKnown RBP14.05□□□□□ -0.16
UBR4-207ENST00000425413 CPA1P15085 419 aa14.05□□□□□ -0.16
UBR4-207ENST00000425413 ANKRD13DQ6ZTN6 518 aa14.05□□□□□ -0.16
UBR4-207ENST00000425413 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
UBR4-207ENST00000425413 TNS3Q68CZ2 1445 aa14.05□□□□□ -0.16
UBR4-207ENST00000425413 NEURL1BA8MQ27 555 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
UBR4-207ENST00000425413 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 SASH1O94885 1247 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 EAF2Q96CJ1 260 aaPredicted RBP14.04□□□□□ -0.16
UBR4-207ENST00000425413 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
UBR4-207ENST00000425413 ZNF335Q9H4Z2 1342 aaPredicted RBP14.04□□□□□ -0.16
UBR4-207ENST00000425413 GCKRQ14397 625 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
UBR4-207ENST00000425413 SGSM2O43147 1006 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 GLRX3O76003 335 aaKnown RBP14.03□□□□□ -0.16
UBR4-207ENST00000425413 MTX1Q13505 466 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 TPRNQ4KMQ1 711 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 L1TD1Q5T7N2 865 aaKnown RBP14.03□□□□□ -0.16
UBR4-207ENST00000425413 BOLA2Q9H3K6 86 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 AOX1Q06278 1338 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
UBR4-207ENST00000425413 NUCB2P80303 420 aa14.02□□□□□ -0.16
UBR4-207ENST00000425413 ZDHHC9Q9Y397 364 aa14.02□□□□□ -0.16
UBR4-207ENST00000425413 NDUFB9Q9Y6M9 179 aa14.02□□□□□ -0.16
UBR4-207ENST00000425413 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
UBR4-207ENST00000425413 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.17
UBR4-207ENST00000425413 EDC3Q96F86 508 aaKnown RBP14.02□□□□□ -0.17
UBR4-207ENST00000425413 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.17
UBR4-207ENST00000425413 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
UBR4-207ENST00000425413 A1BGP04217 495 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 PTH1RQ03431 593 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
UBR4-207ENST00000425413 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 SLAIN2Q9P270 581 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 A0A087WZG4 1122 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 FAM227BQ96M60 508 aa14.01□□□□□ -0.17
UBR4-207ENST00000425413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.173e-10■■□□□ 13.9
UBR4-207ENST00000425413 HSPA4P34932 840 aa14□□□□□ -0.17
UBR4-207ENST00000425413 ERC1Q8IUD2 1116 aa14□□□□□ -0.17
UBR4-207ENST00000425413 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
UBR4-207ENST00000425413 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
UBR4-207ENST00000425413 FSD2A1L4K1 749 aa14□□□□□ -0.17
UBR4-207ENST00000425413 EVA1CP58658 441 aa14□□□□□ -0.17
UBR4-207ENST00000425413 PRPF40BQ6NWY9 871 aaKnown RBP14□□□□□ -0.17
UBR4-207ENST00000425413 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
UBR4-207ENST00000425413 ZBTB3Q9H5J0 574 aa14□□□□□ -0.17
UBR4-207ENST00000425413 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
UBR4-207ENST00000425413 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
UBR4-207ENST00000425413 KCNJ4P48050 445 aa13.99□□□□□ -0.17
UBR4-207ENST00000425413 RAD50Q92878 1312 aa13.99□□□□□ -0.17
UBR4-207ENST00000425413 TTC41PQ6P2S7 1318 aa13.99□□□□□ -0.17
UBR4-207ENST00000425413 NBPF26B4DH59 902 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
UBR4-207ENST00000425413 ANAPC15P60006 121 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 CAVIN1Q6NZI2 390 aaKnown RBP13.98□□□□□ -0.17
UBR4-207ENST00000425413 NBPF10Q6P3W6 841 aaKnown RBP13.98□□□□□ -0.17
UBR4-207ENST00000425413 NBPF15Q8N660 670 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 LRP10Q7Z4F1 713 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 FSD1Q9BTV5 496 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 CHGBP05060 677 aa13.98□□□□□ -0.17
UBR4-207ENST00000425413 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
UBR4-207ENST00000425413 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
UBR4-207ENST00000425413 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 TFCP2Q12800 502 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
UBR4-207ENST00000425413 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
UBR4-207ENST00000425413 UTYO14607 1347 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 DCCP43146 1447 aa13.97□□□□□ -0.17
UBR4-207ENST00000425413 JAKMIP1Q96N16 626 aaKnown RBP13.96□□□□□ -0.17
UBR4-207ENST00000425413 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
UBR4-207ENST00000425413 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
UBR4-207ENST00000425413 AK2P54819 239 aa13.96□□□□□ -0.17
UBR4-207ENST00000425413 COL9A3Q14050 684 aaPredicted RBP13.96□□□□□ -0.17
UBR4-207ENST00000425413 RUFY2Q8WXA3 655 aa13.96□□□□□ -0.17
UBR4-207ENST00000425413 TCEANC2Q96MN5 208 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms