RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 NBPF26B4DH59 902 aa24.48■■□□□ 1.51
SREBF1-206ENST00000423161 NFE2L2Q16236 605 aa24.48■■□□□ 1.51
SREBF1-206ENST00000423161 NBPF10Q6P3W6 841 aaKnown RBP24.48■■□□□ 1.51
SREBF1-206ENST00000423161 CLEC4GQ6UXB4 293 aa24.48■■□□□ 1.51
SREBF1-206ENST00000423161 NBPF15Q8N660 670 aa24.48■■□□□ 1.51
SREBF1-206ENST00000423161 NFKBIEO00221 500 aa24.47■■□□□ 1.51
SREBF1-206ENST00000423161 PRELPP51888 382 aa24.47■■□□□ 1.51
SREBF1-206ENST00000423161 RBM46Q8TBY0 533 aaKnown RBP24.47■■□□□ 1.51
SREBF1-206ENST00000423161 ZNF219Q9P2Y4 722 aaPredicted RBP24.47■■□□□ 1.51
SREBF1-206ENST00000423161 MAPK8IP3Q9UPT6 1336 aa24.46■■□□□ 1.51
SREBF1-206ENST00000423161 NBPF5PQ86XG9 351 aaPredicted RBP24.46■■□□□ 1.51
SREBF1-206ENST00000423161 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
SREBF1-206ENST00000423161 PNNQ9H307 717 aaKnown RBP24.46■■□□□ 1.51
SREBF1-206ENST00000423161 RRAGCQ9HB90 399 aa24.46■■□□□ 1.51
SREBF1-206ENST00000423161 NUP98P52948 1817 aa24.46■■□□□ 1.51
SREBF1-206ENST00000423161 WDR90Q96KV7 1748 aa24.46■■□□□ 1.51
SREBF1-206ENST00000423161 C21orf2O43822 256 aa24.45■■□□□ 1.5
SREBF1-206ENST00000423161 APLP1P51693 650 aa24.45■■□□□ 1.5
SREBF1-206ENST00000423161 THUMPD2Q9BTF0 503 aaKnown RBP24.44■■□□□ 1.5
SREBF1-206ENST00000423161 SRGNP10124 158 aa24.43■■□□□ 1.5
SREBF1-206ENST00000423161 STYK1Q6J9G0 422 aa24.43■■□□□ 1.5
SREBF1-206ENST00000423161 CNKSR1Q969H4 720 aa24.43■■□□□ 1.5
SREBF1-206ENST00000423161 RGL2O15211 777 aa24.42■■□□□ 1.5
SREBF1-206ENST00000423161 NIP7Q9Y221 180 aaKnown RBP eCLIP24.42■■□□□ 1.5
SREBF1-206ENST00000423161 GLTPD2A6NH11 291 aa24.41■■□□□ 1.5
SREBF1-206ENST00000423161 RALBP1Q15311 655 aa24.41■■□□□ 1.5
SREBF1-206ENST00000423161 MASTLQ96GX5 879 aa24.41■■□□□ 1.5
SREBF1-206ENST00000423161 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
SREBF1-206ENST00000423161 PRPF40BQ6NWY9 871 aaKnown RBP24.4■■□□□ 1.5
SREBF1-206ENST00000423161 FSTL1Q12841 308 aa24.39■■□□□ 1.49
SREBF1-206ENST00000423161 HLFQ16534 295 aa24.39■■□□□ 1.49
SREBF1-206ENST00000423161 TPTE2Q6XPS3 522 aa24.39■■□□□ 1.49
SREBF1-206ENST00000423161 LTBP3Q9NS15 1303 aa24.38■■□□□ 1.49
SREBF1-206ENST00000423161 FAM177BA6PVY3 158 aa24.38■■□□□ 1.49
SREBF1-206ENST00000423161 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
SREBF1-206ENST00000423161 TAOK3Q9H2K8 898 aa24.37■■□□□ 1.49
SREBF1-206ENST00000423161 RRP7AQ9Y3A4 280 aaKnown RBP24.37■■□□□ 1.49
SREBF1-206ENST00000423161 ERFEQ4G0M1 354 aa24.36■■□□□ 1.49
SREBF1-206ENST00000423161 SOGA3Q5TF21 947 aa24.36■■□□□ 1.49
SREBF1-206ENST00000423161 VEGFAP15692 232 aaPredicted RBP24.35■■□□□ 1.49
SREBF1-206ENST00000423161 NPR1P16066 1061 aa24.35■■□□□ 1.49
SREBF1-206ENST00000423161 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
SREBF1-206ENST00000423161 MAP3K15Q6ZN16 1313 aa24.35■■□□□ 1.49
SREBF1-206ENST00000423161 KLRG2A4D1S0 409 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-206ENST00000423161 ERVV-1B6SEH8 477 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 MYL6BP14649 208 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 RIPK4P57078 832 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 DPY19L2Q6NUT2 758 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 SMC1BQ8NDV3 1235 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 TSPYL4Q9UJ04 414 aa24.34■■□□□ 1.49
SREBF1-206ENST00000423161 GTF2E1P29083 439 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-206ENST00000423161 KIF6Q6ZMV9 814 aa24.33■■□□□ 1.49
SREBF1-206ENST00000423161 TTLL7Q6ZT98 887 aa24.33■■□□□ 1.49
SREBF1-206ENST00000423161 MYBBP1AQ9BQG0 1328 aaKnown RBP24.33■■□□□ 1.48
SREBF1-206ENST00000423161 DNAJC5GQ8N7S2 189 aa24.32■■□□□ 1.48
SREBF1-206ENST00000423161 CCDC93Q567U6 631 aa24.31■■□□□ 1.48
SREBF1-206ENST00000423161 C7orf43Q8WVR3 580 aa24.31■■□□□ 1.48
SREBF1-206ENST00000423161 NYXQ9GZU5 481 aa24.31■■□□□ 1.48
SREBF1-206ENST00000423161 ERBB4Q15303 1308 aa24.31■■□□□ 1.48
SREBF1-206ENST00000423161 ABCC12Q96J65 1359 aa24.3■■□□□ 1.48
SREBF1-206ENST00000423161 TMPOP42166 694 aaKnown RBP24.3■■□□□ 1.48
SREBF1-206ENST00000423161 LMOD3Q0VAK6 560 aa24.3■■□□□ 1.48
SREBF1-206ENST00000423161 ZBTB3Q9H5J0 574 aa24.3■■□□□ 1.48
SREBF1-206ENST00000423161 HTRA3P83110 453 aa24.29■■□□□ 1.48
SREBF1-206ENST00000423161 POTECB2RU33 542 aa24.28■■□□□ 1.48
SREBF1-206ENST00000423161 GPTP24298 496 aa24.28■■□□□ 1.48
SREBF1-206ENST00000423161 NUTM1Q86Y26 1132 aa24.28■■□□□ 1.48
SREBF1-206ENST00000423161 ANKRD36CQ5JPF3 1778 aa24.27■■□□□ 1.48
SREBF1-206ENST00000423161 BABAM1Q9NWV8 329 aa24.27■■□□□ 1.48
SREBF1-206ENST00000423161 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
SREBF1-206ENST00000423161 IBTKQ9P2D0 1353 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-206ENST00000423161 ALDH1B1P30837 517 aa24.26■■□□□ 1.47
SREBF1-206ENST00000423161 OLFM4Q6UX06 510 aa24.26■■□□□ 1.47
SREBF1-206ENST00000423161 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
SREBF1-206ENST00000423161 RIC1Q4ADV7 1423 aa24.26■■□□□ 1.47
SREBF1-206ENST00000423161 EIF2S2P20042 333 aaKnown RBP24.25■■□□□ 1.47
SREBF1-206ENST00000423161 FKBP4Q02790 459 aaKnown RBP eCLIP24.25■■□□□ 1.47
SREBF1-206ENST00000423161 CRY2Q49AN0 593 aa24.25■■□□□ 1.47
SREBF1-206ENST00000423161 GIGYF2Q6Y7W6 1299 aaKnown RBP24.25■■□□□ 1.47
SREBF1-206ENST00000423161 SCN4AP35499 1836 aa24.25■■□□□ 1.47
SREBF1-206ENST00000423161 DDNO94850 711 aaPredicted RBP24.24■■□□□ 1.47
SREBF1-206ENST00000423161 NEUROD2Q15784 382 aa24.24■■□□□ 1.47
SREBF1-206ENST00000423161 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.474e-6■■□□□ 14
SREBF1-206ENST00000423161 PDIA6Q15084 440 aa24.23■■□□□ 1.47
SREBF1-206ENST00000423161 SUSD4Q5VX71 490 aa24.23■■□□□ 1.47
SREBF1-206ENST00000423161 ZNF34Q8IZ26 560 aa24.23■■□□□ 1.47
SREBF1-206ENST00000423161 RTKN2Q8IZC4 609 aa24.23■■□□□ 1.47
SREBF1-206ENST00000423161 KLRG1Q96E93 195 aa24.23■■□□□ 1.47
SREBF1-206ENST00000423161 LRP10Q7Z4F1 713 aa24.22■■□□□ 1.47
SREBF1-206ENST00000423161 RPGRQ92834 1020 aaKnown RBP24.22■■□□□ 1.47
SREBF1-206ENST00000423161 ZNF277Q9NRM2 450 aaPredicted RBP24.22■■□□□ 1.47
SREBF1-206ENST00000423161 NTSR2O95665 410 aa24.21■■□□□ 1.47
SREBF1-206ENST00000423161 ANXA1P04083 346 aa24.21■■□□□ 1.47
SREBF1-206ENST00000423161 PROSER3Q2NL68 480 aa24.21■■□□□ 1.47
SREBF1-206ENST00000423161 RUNDC1Q96C34 613 aa24.21■■□□□ 1.47
SREBF1-206ENST00000423161 LAMB2P55268 1798 aa24.2■■□□□ 1.46
SREBF1-206ENST00000423161 SNED1Q8TER0 1413 aa24.19■■□□□ 1.46
SREBF1-206ENST00000423161 PARP10Q53GL7 1025 aa24.19■■□□□ 1.46
SREBF1-206ENST00000423161 PPP1R42Q7Z4L9 355 aa24.19■■□□□ 1.46
SREBF1-206ENST00000423161 NECTIN2Q92692 538 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms