RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 FAM9BQ8IZU0 186 aa34.34■■■■□ 3.09
CDK9-202ENST00000421939 PDIA6Q15084 440 aa34.33■■■■□ 3.09
CDK9-202ENST00000421939 NCBP3Q53F19 620 aaKnown RBP34.33■■■■□ 3.09
CDK9-202ENST00000421939 TTLL7Q6ZT98 887 aa34.33■■■■□ 3.09
CDK9-202ENST00000421939 NECTIN2Q92692 538 aa34.33■■■■□ 3.09
CDK9-202ENST00000421939 MAP3K15Q6ZN16 1313 aa34.32■■■■□ 3.09
CDK9-202ENST00000421939 LRP10Q7Z4F1 713 aa34.32■■■■□ 3.08
CDK9-202ENST00000421939 WWC1Q8IX03 1113 aa34.32■■■■□ 3.08
CDK9-202ENST00000421939 ERVV-1B6SEH8 477 aa34.31■■■■□ 3.08
CDK9-202ENST00000421939 KCNA3P22001 575 aa34.31■■■■□ 3.08
CDK9-202ENST00000421939 HLFQ16534 295 aa34.31■■■■□ 3.08
CDK9-202ENST00000421939 PROSER3Q2NL68 480 aa34.31■■■■□ 3.08
CDK9-202ENST00000421939 CHRNA5P30532 468 aa34.3■■■■□ 3.08
CDK9-202ENST00000421939 PRR5LQ6MZQ0 368 aa34.3■■■■□ 3.08
CDK9-202ENST00000421939 CNBD1Q8NA66 436 aa34.3■■■■□ 3.08
CDK9-202ENST00000421939 ANXA1P04083 346 aa34.29■■■■□ 3.08
CDK9-202ENST00000421939 HDGFL1Q5TGJ6 251 aa34.29■■■■□ 3.08
CDK9-202ENST00000421939 DUSP27Q5VZP5 1158 aa34.29■■■■□ 3.08
CDK9-202ENST00000421939 NIP7Q9Y221 180 aaKnown RBP eCLIP34.29■■■■□ 3.08
CDK9-202ENST00000421939 BCS1LQ9Y276 419 aa34.28■■■■□ 3.08
CDK9-202ENST00000421939 ANKRD31Q8N7Z5 1873 aa34.27■■■■□ 3.08
CDK9-202ENST00000421939 NPHP1O15259 732 aa34.27■■■■□ 3.08
CDK9-202ENST00000421939 ZBTB3Q9H5J0 574 aa34.27■■■■□ 3.08
CDK9-202ENST00000421939 DDX21Q9NR30 783 aaKnown RBP eCLIP34.27■■■■□ 3.08
CDK9-202ENST00000421939 PIM2Q9P1W9 311 aa34.27■■■■□ 3.08
CDK9-202ENST00000421939 ATP10DQ9P241 1426 aa34.27■■■■□ 3.08
CDK9-202ENST00000421939 NUP98P52948 1817 aa34.26■■■■□ 3.08
CDK9-202ENST00000421939 NBPF5PQ86XG9 351 aaPredicted RBP34.26■■■■□ 3.08
CDK9-202ENST00000421939 DLEC1Q9Y238 1755 aa34.26■■■■□ 3.07
CDK9-202ENST00000421939 ST5P78524 1137 aa34.25■■■■□ 3.07
CDK9-202ENST00000421939 CHPF2Q9P2E5 772 aa34.25■■■■□ 3.07
CDK9-202ENST00000421939 CCDC24Q8N4L8 307 aa34.24■■■■□ 3.07
CDK9-202ENST00000421939 BRIP1Q9BX63 1249 aa34.24■■■■□ 3.07
CDK9-202ENST00000421939 IL16Q14005 1332 aa34.24■■■■□ 3.07
CDK9-202ENST00000421939 SALL2Q9Y467 1007 aaPredicted RBP34.23■■■■□ 3.07
CDK9-202ENST00000421939 DALRD3Q5D0E6 543 aaKnown RBP34.22■■■■□ 3.07
CDK9-202ENST00000421939 C2CD5Q86YS7 1000 aa34.22■■■■□ 3.07
CDK9-202ENST00000421939 ARFGEF1Q9Y6D6 1849 aa34.22■■■■□ 3.07
CDK9-202ENST00000421939 XAGE3Q8WTP9 111 aa34.21■■■■□ 3.07
CDK9-202ENST00000421939 TSR2Q969E8 191 aaKnown RBP34.21■■■■□ 3.07
CDK9-202ENST00000421939 DBF4Q9UBU7 674 aaPredicted RBP34.21■■■■□ 3.07
CDK9-202ENST00000421939 PDE6BP35913 854 aa34.2■■■■□ 3.07
CDK9-202ENST00000421939 GIGYF2Q6Y7W6 1299 aaKnown RBP34.2■■■■□ 3.07
CDK9-202ENST00000421939 COPS6Q7L5N1 327 aa34.2■■■■□ 3.07
CDK9-202ENST00000421939 C8orf58Q8NAV2 365 aa34.2■■■■□ 3.07
CDK9-202ENST00000421939 PDZRN3Q9UPQ7 1066 aa34.2■■■■□ 3.07
CDK9-202ENST00000421939 COL11A2P13942 1736 aaPredicted RBP34.2■■■■□ 3.07
CDK9-202ENST00000421939 H0YIN7 160 aa34.19■■■■□ 3.06
CDK9-202ENST00000421939 FAM177BA6PVY3 158 aa34.18■■■■□ 3.06
CDK9-202ENST00000421939 ELL2O00472 640 aaPredicted RBP34.18■■■■□ 3.06
CDK9-202ENST00000421939 AIMP1Q12904 312 aaKnown RBP34.18■■■■□ 3.06
CDK9-202ENST00000421939 TPTE2Q6XPS3 522 aa34.18■■■■□ 3.06
CDK9-202ENST00000421939 WDR63Q8IWG1 891 aa34.17■■■■□ 3.06
CDK9-202ENST00000421939 UBN2Q6ZU65 1347 aa34.16■■■■□ 3.06
CDK9-202ENST00000421939 GPTP24298 496 aa34.16■■■■□ 3.06
CDK9-202ENST00000421939 IBTKQ9P2D0 1353 aaPredicted RBP34.15■■■■□ 3.06
CDK9-202ENST00000421939 CCER2I3L3R5 266 aa34.14■■■■□ 3.06
CDK9-202ENST00000421939 ZNF34Q8IZ26 560 aa34.14■■■■□ 3.06
CDK9-202ENST00000421939 NYXQ9GZU5 481 aa34.14■■■■□ 3.06
CDK9-202ENST00000421939 HYPKQ9NX55 129 aa34.14■■■■□ 3.06
CDK9-202ENST00000421939 TTLL6Q8N841 843 aa34.13■■■■□ 3.05
CDK9-202ENST00000421939 ANKRD36CQ5JPF3 1778 aa34.13■■■■□ 3.05
CDK9-202ENST00000421939 TSPYL6Q8N831 410 aa34.12■■■■□ 3.05
CDK9-202ENST00000421939 FANCIQ9NVI1 1328 aa34.11■■■■□ 3.05
CDK9-202ENST00000421939 GTF2E1P29083 439 aaPredicted RBP34.11■■■■□ 3.05
CDK9-202ENST00000421939 HSP90AB3PQ58FF7 597 aa34.11■■■■□ 3.05
CDK9-202ENST00000421939 ARHGAP27Q6ZUM4 889 aa34.11■■■■□ 3.05
CDK9-202ENST00000421939 CHMP4AQ9BY43 222 aa34.11■■■■□ 3.05
CDK9-202ENST00000421939 PARP10Q53GL7 1025 aa34.1■■■■□ 3.05
CDK9-202ENST00000421939 ZNF622Q969S3 477 aaKnown RBP eCLIP34.1■■■■□ 3.05
CDK9-202ENST00000421939 ABCC12Q96J65 1359 aa34.1■■■■□ 3.05
CDK9-202ENST00000421939 CCDC30Q5VVM6 783 aa34.09■■■■□ 3.05
CDK9-202ENST00000421939 SUSD4Q5VX71 490 aa34.09■■■■□ 3.05
CDK9-202ENST00000421939 SRGNP10124 158 aa34.08■■■■□ 3.05
CDK9-202ENST00000421939 NUTM1Q86Y26 1132 aa34.08■■■■□ 3.05
CDK9-202ENST00000421939 PLBD2Q8NHP8 589 aa34.08■■■■□ 3.05
CDK9-202ENST00000421939 TNRC6CQ9HCJ0 1690 aaKnown RBP34.08■■■■□ 3.05
CDK9-202ENST00000421939 NTSR2O95665 410 aa34.07■■■■□ 3.04
CDK9-202ENST00000421939 STYK1Q6J9G0 422 aa34.07■■■■□ 3.04
CDK9-202ENST00000421939 ZNF784Q8NCA9 323 aaPredicted RBP34.07■■■■□ 3.04
CDK9-202ENST00000421939 KLRG2A4D1S0 409 aaPredicted RBP34.06■■■■□ 3.04
CDK9-202ENST00000421939 TWISTNBQ3B726 338 aaPredicted RBP34.06■■■■□ 3.04
CDK9-202ENST00000421939 RIC1Q4ADV7 1423 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 TCIRG1Q13488 830 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 ERFEQ4G0M1 354 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 ANKRD13DQ6ZTN6 518 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 PPP1R42Q7Z4L9 355 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 MASTLQ96GX5 879 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 ADCY9O60503 1353 aa34.05■■■■□ 3.04
CDK9-202ENST00000421939 DIEXFQ68CQ4 756 aaKnown RBP34.04■■■■□ 3.04
CDK9-202ENST00000421939 CNKSR1Q969H4 720 aa34.03■■■■□ 3.04
CDK9-202ENST00000421939 ARFGEF2Q9Y6D5 1785 aa34.03■■■■□ 3.04
CDK9-202ENST00000421939 ZNF521Q96K83 1311 aa34.03■■■■□ 3.04
CDK9-202ENST00000421939 GOLGA2Q08379 1002 aa34.02■■■■□ 3.04
CDK9-202ENST00000421939 NLRP10Q86W26 655 aa34.02■■■■□ 3.04
CDK9-202ENST00000421939 UTP14AQ9BVJ6 771 aaKnown RBP34.02■■■■□ 3.04
CDK9-202ENST00000421939 PHAXQ9H814 394 aaKnown RBP34.02■■■■□ 3.04
CDK9-202ENST00000421939 SPINK5Q9NQ38 1064 aaPredicted RBP34.02■■■■□ 3.04
CDK9-202ENST00000421939 NPR1P16066 1061 aa34.01■■■■□ 3.03
CDK9-202ENST00000421939 MYH16Q9H6N6 1097 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms