RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 SGSM2O43147 1006 aa19.7■□□□□ 0.74
CTSB-203ENST00000420692 CPDO75976 1380 aa19.69■□□□□ 0.74
CTSB-203ENST00000420692 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
CTSB-203ENST00000420692 HSPA4P34932 840 aa19.69■□□□□ 0.74
CTSB-203ENST00000420692 NUCB2P80303 420 aa19.69■□□□□ 0.74
CTSB-203ENST00000420692 COPS6Q7L5N1 327 aa19.69■□□□□ 0.74
CTSB-203ENST00000420692 ARXQ96QS3 562 aa19.69■□□□□ 0.74
CTSB-203ENST00000420692 SASH1O94885 1247 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 PIP4K2AP48426 406 aaPredicted RBP19.68■□□□□ 0.74
CTSB-203ENST00000420692 OS9Q13438 667 aaPredicted RBP19.68■□□□□ 0.74
CTSB-203ENST00000420692 DCAF5Q96JK2 942 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 TTC41PQ6P2S7 1318 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 NEURL1BA8MQ27 555 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 GLI3P10071 1580 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 RIC3Q7Z5B4 369 aa19.68■□□□□ 0.74
CTSB-203ENST00000420692 MCCP23508 829 aa19.67■□□□□ 0.74
CTSB-203ENST00000420692 EPHA10Q5JZY3 1008 aa19.67■□□□□ 0.74
CTSB-203ENST00000420692 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
CTSB-203ENST00000420692 BRINP3Q76B58 766 aa19.67■□□□□ 0.74
CTSB-203ENST00000420692 LSG1Q9H089 658 aaKnown RBP19.67■□□□□ 0.74
CTSB-203ENST00000420692 EPB41L2O43491 1005 aaKnown RBP19.67■□□□□ 0.74
CTSB-203ENST00000420692 CUL4AQ13619 759 aa19.67■□□□□ 0.74
CTSB-203ENST00000420692 CLASRPQ8N2M8 674 aaKnown RBP19.67■□□□□ 0.74
CTSB-203ENST00000420692 PANK2Q9BZ23 570 aa19.67■□□□□ 0.74
CTSB-203ENST00000420692 SKOR2Q2VWA4 1001 aaPredicted RBP19.66■□□□□ 0.74
CTSB-203ENST00000420692 GAS2L3Q86XJ1 694 aa19.66■□□□□ 0.74
CTSB-203ENST00000420692 CNTROBQ8N137 903 aa19.66■□□□□ 0.74
CTSB-203ENST00000420692 UPF3BQ9BZI7 483 aaKnown RBP19.66■□□□□ 0.74
CTSB-203ENST00000420692 GLRX3O76003 335 aaKnown RBP19.66■□□□□ 0.74
CTSB-203ENST00000420692 SNRPA1P09661 255 aaKnown RBP19.66■□□□□ 0.74
CTSB-203ENST00000420692 GCKRQ14397 625 aa19.66■□□□□ 0.74
CTSB-203ENST00000420692 METTL22Q9BUU2 404 aaPredicted RBP19.66■□□□□ 0.74
CTSB-203ENST00000420692 PLEKHG2Q9H7P9 1386 aa19.66■□□□□ 0.74
CTSB-203ENST00000420692 RAD50Q92878 1312 aa19.65■□□□□ 0.74
CTSB-203ENST00000420692 EAF2Q96CJ1 260 aaPredicted RBP19.65■□□□□ 0.74
CTSB-203ENST00000420692 ECHDC1Q9NTX5 307 aa19.65■□□□□ 0.74
CTSB-203ENST00000420692 CHAMP1Q96JM3 812 aa19.64■□□□□ 0.74
CTSB-203ENST00000420692 MYD88Q99836 296 aa19.64■□□□□ 0.74
CTSB-203ENST00000420692 MCM2P49736 904 aa19.64■□□□□ 0.73
CTSB-203ENST00000420692 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
CTSB-203ENST00000420692 ERC1Q8IUD2 1116 aa19.64■□□□□ 0.73
CTSB-203ENST00000420692 RASEFQ8IZ41 740 aa19.64■□□□□ 0.73
CTSB-203ENST00000420692 KLHDC4Q8TBB5 520 aa19.64■□□□□ 0.73
CTSB-203ENST00000420692 HDAC5Q9UQL6 1122 aa19.64■□□□□ 0.73
CTSB-203ENST00000420692 PTMSP20962 102 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 ANKRD13DQ6ZTN6 518 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 LMBRD1Q9NUN5 540 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 SNX14Q9Y5W7 946 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
CTSB-203ENST00000420692 AACSQ86V21 672 aa19.63■□□□□ 0.73
CTSB-203ENST00000420692 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
CTSB-203ENST00000420692 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
CTSB-203ENST00000420692 TLR7Q9NYK1 1049 aaKnown RBP19.62■□□□□ 0.73
CTSB-203ENST00000420692 IFIT2P09913 472 aaKnown RBP19.61■□□□□ 0.73
CTSB-203ENST00000420692 CABP4P57796 275 aa19.61■□□□□ 0.73
CTSB-203ENST00000420692 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
CTSB-203ENST00000420692 PTH1RQ03431 593 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.73
CTSB-203ENST00000420692 KLHL40Q2TBA0 621 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 CCDC8Q9H0W5 538 aaPredicted RBP19.6■□□□□ 0.73
CTSB-203ENST00000420692 SIL1Q9H173 461 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
CTSB-203ENST00000420692 MRE11P49959 708 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 GRPEL1Q9HAV7 217 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 ARFGEF2Q9Y6D5 1785 aa19.6■□□□□ 0.73
CTSB-203ENST00000420692 GOLGA6L22H0YM25 854 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 INTS4Q96HW7 963 aaKnown RBP19.59■□□□□ 0.73
CTSB-203ENST00000420692 TTC14Q96N46 770 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
CTSB-203ENST00000420692 NBPF26B4DH59 902 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 RFX5P48382 616 aaPredicted RBP19.59■□□□□ 0.73
CTSB-203ENST00000420692 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 NBPF10Q6P3W6 841 aaKnown RBP19.59■□□□□ 0.73
CTSB-203ENST00000420692 NBPF15Q8N660 670 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
CTSB-203ENST00000420692 STRCQ7RTU9 1775 aa19.58■□□□□ 0.73
CTSB-203ENST00000420692 SOS2Q07890 1332 aaPredicted RBP19.58■□□□□ 0.73
CTSB-203ENST00000420692 DDX49Q9Y6V7 483 aaKnown RBP19.58■□□□□ 0.73
CTSB-203ENST00000420692 BRD1O95696 1058 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 ATP5J2-PTCD1G3V325 749 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 PTCD1O75127 700 aaKnown RBP19.57■□□□□ 0.72
CTSB-203ENST00000420692 CASP7P55210 303 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
CTSB-203ENST00000420692 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
CTSB-203ENST00000420692 EVI5LQ96CN4 794 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 PRDM11Q9NQV5 511 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 DIAPH3Q9NSV4 1193 aa19.57■□□□□ 0.72
CTSB-203ENST00000420692 GPATCH3Q96I76 525 aa19.56■□□□□ 0.72
CTSB-203ENST00000420692 ISY1Q9ULR0 285 aaKnown RBP19.56■□□□□ 0.72
CTSB-203ENST00000420692 RABL6Q3YEC7 729 aaPredicted RBP19.56■□□□□ 0.72
CTSB-203ENST00000420692 ZCRB1Q8TBF4 217 aaKnown RBP19.56■□□□□ 0.72
CTSB-203ENST00000420692 COL5A2P05997 1499 aaPredicted RBP19.56■□□□□ 0.72
CTSB-203ENST00000420692 CPA1P15085 419 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
CTSB-203ENST00000420692 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 KCNB2Q92953 911 aa19.55■□□□□ 0.72
CTSB-203ENST00000420692 FAM227BQ96M60 508 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms