RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 MMP10P09238 476 aa27.58■■■□□ 2.01
HMCES-203ENST00000417226 AIMP1Q12904 312 aaKnown RBP27.58■■■□□ 2.01
HMCES-203ENST00000417226 XAGE3Q8WTP9 111 aa27.58■■■□□ 2.01
HMCES-203ENST00000417226 NUP98P52948 1817 aa27.58■■■□□ 2.01
HMCES-203ENST00000417226 STK31Q9BXU1 1019 aa27.57■■■□□ 2
HMCES-203ENST00000417226 HYPKQ9NX55 129 aa27.57■■■□□ 2
HMCES-203ENST00000417226 PPP1R1BQ9UD71 204 aaPredicted RBP27.57■■■□□ 2
HMCES-203ENST00000417226 CACNA1FO60840 1977 aa27.57■■■□□ 2
HMCES-203ENST00000417226 COPS6Q7L5N1 327 aa27.57■■■□□ 2
HMCES-203ENST00000417226 MAP3K15Q6ZN16 1313 aa27.57■■■□□ 2
HMCES-203ENST00000417226 ZBTB3Q9H5J0 574 aa27.56■■■□□ 2
HMCES-203ENST00000417226 ZNF652Q9Y2D9 606 aa27.56■■■□□ 2
HMCES-203ENST00000417226 NFIXQ14938 502 aa27.53■■■□□ 2
HMCES-203ENST00000417226 HLFQ16534 295 aa27.53■■■□□ 2
HMCES-203ENST00000417226 TBC1D9BQ66K14 1250 aa27.53■■■□□ 2
HMCES-203ENST00000417226 BICDL1Q6ZP65 573 aa27.53■■■□□ 2
HMCES-203ENST00000417226 PHAXQ9H814 394 aaKnown RBP27.53■■■□□ 2
HMCES-203ENST00000417226 ERVV-1B6SEH8 477 aa27.52■■■□□ 2
HMCES-203ENST00000417226 DDR1Q08345 913 aa27.52■■■□□ 2
HMCES-203ENST00000417226 CLEC4GQ6UXB4 293 aa27.52■■■□□ 2
HMCES-203ENST00000417226 AFDNP55196 1824 aaKnown RBP27.52■■■□□ 2
HMCES-203ENST00000417226 TM4SF1P30408 202 aa27.51■■■□□ 2
HMCES-203ENST00000417226 PARP3Q9Y6F1 533 aa27.51■■■□□ 2
HMCES-203ENST00000417226 ARFGEF2Q9Y6D5 1785 aa27.51■■□□□ 1.99
HMCES-203ENST00000417226 ANKRD36CQ5JPF3 1778 aa27.51■■□□□ 1.99
HMCES-203ENST00000417226 SLC4A2P04920 1241 aa27.51■■□□□ 1.99
HMCES-203ENST00000417226 RGL2O15211 777 aa27.5■■□□□ 1.99
HMCES-203ENST00000417226 POLRMTO00411 1230 aaKnown RBP27.49■■□□□ 1.99
HMCES-203ENST00000417226 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
HMCES-203ENST00000417226 KLHL34Q8N239 644 aa27.48■■□□□ 1.99
HMCES-203ENST00000417226 CARMIL3Q8ND23 1372 aa27.48■■□□□ 1.99
HMCES-203ENST00000417226 NRXN2Q9P2S2 1712 aa27.47■■□□□ 1.99
HMCES-203ENST00000417226 ATP10DQ9P241 1426 aa27.47■■□□□ 1.99
HMCES-203ENST00000417226 GIGYF2Q6Y7W6 1299 aaKnown RBP27.47■■□□□ 1.99
HMCES-203ENST00000417226 PLBD2Q8NHP8 589 aa27.47■■□□□ 1.99
HMCES-203ENST00000417226 SETDB2Q96T68 719 aa27.47■■□□□ 1.99
HMCES-203ENST00000417226 NIP7Q9Y221 180 aaKnown RBP eCLIP27.47■■□□□ 1.99
HMCES-203ENST00000417226 ANKRD13DQ6ZTN6 518 aa27.46■■□□□ 1.99
HMCES-203ENST00000417226 G2E3Q7L622 706 aa27.46■■□□□ 1.99
HMCES-203ENST00000417226 FHDC1Q9C0D6 1143 aaPredicted RBP27.45■■□□□ 1.99
HMCES-203ENST00000417226 CT47B1P0C2W7 299 aaPredicted RBP27.44■■□□□ 1.98
HMCES-203ENST00000417226 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
HMCES-203ENST00000417226 SERPINB2P05120 415 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 GPTP24298 496 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 FLIIQ13045 1269 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 RIC3Q7Z5B4 369 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 ZNF428Q96B54 188 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 KIF13BQ9NQT8 1826 aa27.44■■□□□ 1.98
HMCES-203ENST00000417226 BCL2L13Q9BXK5 485 aa27.42■■□□□ 1.98
HMCES-203ENST00000417226 C10orf71Q711Q0 1435 aa27.42■■□□□ 1.98
HMCES-203ENST00000417226 HSP90AB3PQ58FF7 597 aa27.41■■□□□ 1.98
HMCES-203ENST00000417226 SSH1Q8WYL5 1049 aa27.41■■□□□ 1.98
HMCES-203ENST00000417226 UBN2Q6ZU65 1347 aa27.41■■□□□ 1.98
HMCES-203ENST00000417226 FAM177BA6PVY3 158 aa27.4■■□□□ 1.98
HMCES-203ENST00000417226 FKBP5Q13451 457 aaPredicted RBP27.4■■□□□ 1.98
HMCES-203ENST00000417226 NBPF5PQ86XG9 351 aaPredicted RBP27.4■■□□□ 1.98
HMCES-203ENST00000417226 ZNF34Q8IZ26 560 aa27.4■■□□□ 1.98
HMCES-203ENST00000417226 ADCY9O60503 1353 aa27.4■■□□□ 1.98
HMCES-203ENST00000417226 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
HMCES-203ENST00000417226 NPHP1O15259 732 aa27.39■■□□□ 1.98
HMCES-203ENST00000417226 TCIRG1Q13488 830 aa27.39■■□□□ 1.98
HMCES-203ENST00000417226 PI4KAP2A4QPH2 592 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 KSR2Q6VAB6 950 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 MRPL50Q8N5N7 158 aaKnown RBP27.38■■□□□ 1.97
HMCES-203ENST00000417226 PI4KAP1Q8N8J0 262 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 CNBD1Q8NA66 436 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 SMC4Q9NTJ3 1288 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 MAP3K2Q9Y2U5 619 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 SYT17Q9BSW7 474 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 CD2APQ9Y5K6 639 aa27.38■■□□□ 1.97
HMCES-203ENST00000417226 PRR5LQ6MZQ0 368 aa27.37■■□□□ 1.97
HMCES-203ENST00000417226 ANKRD31Q8N7Z5 1873 aa27.36■■□□□ 1.97
HMCES-203ENST00000417226 ATP5J2-PTCD1G3V325 749 aa27.36■■□□□ 1.97
HMCES-203ENST00000417226 PARP10Q53GL7 1025 aa27.36■■□□□ 1.97
HMCES-203ENST00000417226 CCDC24Q8N4L8 307 aa27.36■■□□□ 1.97
HMCES-203ENST00000417226 MYD88Q99836 296 aa27.36■■□□□ 1.97
HMCES-203ENST00000417226 RARSP54136 660 aaKnown RBP27.35■■□□□ 1.97
HMCES-203ENST00000417226 NLGN2Q8NFZ4 835 aa27.35■■□□□ 1.97
HMCES-203ENST00000417226 KIAA1551Q9HCM1 1747 aa27.35■■□□□ 1.97
HMCES-203ENST00000417226 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
HMCES-203ENST00000417226 SUSD4Q5VX71 490 aa27.34■■□□□ 1.97
HMCES-203ENST00000417226 TPTE2Q6XPS3 522 aa27.34■■□□□ 1.97
HMCES-203ENST00000417226 NLRP10Q86W26 655 aa27.34■■□□□ 1.97
HMCES-203ENST00000417226 METTL22Q9BUU2 404 aaPredicted RBP27.34■■□□□ 1.97
HMCES-203ENST00000417226 ST5P78524 1137 aa27.33■■□□□ 1.97
HMCES-203ENST00000417226 ISCA1Q9BUE6 129 aa27.33■■□□□ 1.97
HMCES-203ENST00000417226 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
HMCES-203ENST00000417226 IBTKQ9P2D0 1353 aaPredicted RBP27.33■■□□□ 1.97
HMCES-203ENST00000417226 PPP1R42Q7Z4L9 355 aa27.32■■□□□ 1.96
HMCES-203ENST00000417226 NTSR2O95665 410 aa27.32■■□□□ 1.96
HMCES-203ENST00000417226 GTF2E1P29083 439 aaPredicted RBP27.32■■□□□ 1.96
HMCES-203ENST00000417226 NUTM1Q86Y26 1132 aa27.32■■□□□ 1.96
HMCES-203ENST00000417226 PXDNLA1KZ92 1463 aa27.31■■□□□ 1.96
HMCES-203ENST00000417226 F6X3S4 739 aa27.31■■□□□ 1.96
HMCES-203ENST00000417226 NEXNQ0ZGT2 675 aa27.31■■□□□ 1.96
HMCES-203ENST00000417226 DNAAF4Q8WXU2 420 aa27.31■■□□□ 1.96
HMCES-203ENST00000417226 UTP14AQ9BVJ6 771 aaKnown RBP27.3■■□□□ 1.96
HMCES-203ENST00000417226 ABCC12Q96J65 1359 aa27.29■■□□□ 1.96
HMCES-203ENST00000417226 PTPRCP08575 1304 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms