RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 STK31Q9BXU1 1019 aa10.34□□□□□ -0.75
MDC1-203ENST00000417033 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
MDC1-203ENST00000417033 NOB1Q9ULX3 412 aaKnown RBP10.34□□□□□ -0.75
MDC1-203ENST00000417033 ERBB4Q15303 1308 aa10.33□□□□□ -0.76
MDC1-203ENST00000417033 PHF14O94880 888 aa10.33□□□□□ -0.76
MDC1-203ENST00000417033 FLIIQ13045 1269 aa10.33□□□□□ -0.76
MDC1-203ENST00000417033 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
MDC1-203ENST00000417033 DBF4Q9UBU7 674 aaPredicted RBP10.33□□□□□ -0.76
MDC1-203ENST00000417033 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
MDC1-203ENST00000417033 ADCY9O60503 1353 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 COL15A1P39059 1388 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 F6X3S4 739 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
MDC1-203ENST00000417033 RRP1P56182 461 aaKnown RBP10.32□□□□□ -0.76
MDC1-203ENST00000417033 C20orf194Q5TEA3 1177 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 COPS6Q7L5N1 327 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 ZNF428Q96B54 188 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 AK7Q96M32 723 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 TUBGCP6Q96RT7 1819 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 EP400Q96L91 3159 aa10.32□□□□□ -0.76
MDC1-203ENST00000417033 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 RLBP1P12271 317 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 TRIM27P14373 513 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
MDC1-203ENST00000417033 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
MDC1-203ENST00000417033 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
MDC1-203ENST00000417033 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 CCDC125Q86Z20 511 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 SRP68Q9UHB9 627 aaKnown RBP10.31□□□□□ -0.76
MDC1-203ENST00000417033 TBC1D2BQ9UPU7 963 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 RNF123Q5XPI4 1314 aa10.31□□□□□ -0.76
MDC1-203ENST00000417033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
MDC1-203ENST00000417033 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
MDC1-203ENST00000417033 FKBP5Q13451 457 aaPredicted RBP10.3□□□□□ -0.76
MDC1-203ENST00000417033 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
MDC1-203ENST00000417033 PNPLA7Q6ZV29 1317 aa10.3□□□□□ -0.76
MDC1-203ENST00000417033 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
MDC1-203ENST00000417033 C4AP0C0L4 1744 aa10.3□□□□□ -0.76
MDC1-203ENST00000417033 PI4KAP2A4QPH2 592 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 CAMTA2O94983 1202 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 HLFQ16534 295 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 PI4KAP1Q8N8J0 262 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 PANK1Q8TE04 598 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
MDC1-203ENST00000417033 ARXQ96QS3 562 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 PDGFDQ9GZP0 370 aaPredicted RBP10.29□□□□□ -0.76
MDC1-203ENST00000417033 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
MDC1-203ENST00000417033 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
MDC1-203ENST00000417033 SLC15A2Q16348 729 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 COL23A1Q86Y22 540 aaPredicted RBP10.28□□□□□ -0.76
MDC1-203ENST00000417033 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 TFCP2L1Q9NZI6 479 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 MAP3K2Q9Y2U5 619 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 ABCC4O15439 1325 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
MDC1-203ENST00000417033 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 ARFGEF2Q9Y6D5 1785 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 SSFA2P28290 1259 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 USPL1Q5W0Q7 1092 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 SLC4A10Q6U841 1118 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 KSR2Q6VAB6 950 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 KIF6Q6ZMV9 814 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 TMEM57Q8N5G2 664 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 SCN7AQ01118 1682 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 PTPRCP08575 1304 aa10.27□□□□□ -0.77
MDC1-203ENST00000417033 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
MDC1-203ENST00000417033 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
MDC1-203ENST00000417033 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 MYD88Q99836 296 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
MDC1-203ENST00000417033 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
MDC1-203ENST00000417033 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
MDC1-203ENST00000417033 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
MDC1-203ENST00000417033 IGKV5-2P06315 115 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 GPTP24298 496 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 BEND3Q5T5X7 828 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 MSL1Q68DK7 614 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 DZIP1LQ8IYY4 767 aaKnown RBP10.25□□□□□ -0.77
MDC1-203ENST00000417033 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
MDC1-203ENST00000417033 NARFQ9UHQ1 456 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 UBN2Q6ZU65 1347 aa10.25□□□□□ -0.77
MDC1-203ENST00000417033 A0A087WZG4 1122 aa10.24□□□□□ -0.77
MDC1-203ENST00000417033 DDX58O95786 925 aaKnown RBP10.24□□□□□ -0.77
MDC1-203ENST00000417033 GYS1P13807 737 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms