RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
CHEK2-210ENST00000416671 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
CHEK2-210ENST00000416671 BRD1O95696 1058 aa16.66■□□□□ 0.26
CHEK2-210ENST00000416671 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
CHEK2-210ENST00000416671 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
CHEK2-210ENST00000416671 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
CHEK2-210ENST00000416671 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
CHEK2-210ENST00000416671 ATP2B3Q16720 1220 aa16.65■□□□□ 0.26
CHEK2-210ENST00000416671 MPNDQ8N594 471 aa16.65■□□□□ 0.26
CHEK2-210ENST00000416671 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
CHEK2-210ENST00000416671 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
CHEK2-210ENST00000416671 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
CHEK2-210ENST00000416671 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
CHEK2-210ENST00000416671 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
CHEK2-210ENST00000416671 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
CHEK2-210ENST00000416671 ERC2O15083 957 aa16.64■□□□□ 0.25
CHEK2-210ENST00000416671 NEK4P51957 841 aa16.64■□□□□ 0.25
CHEK2-210ENST00000416671 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
CHEK2-210ENST00000416671 ERBB3P21860 1342 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
CHEK2-210ENST00000416671 GNAI3P08754 354 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 MCM2P49736 904 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
CHEK2-210ENST00000416671 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
CHEK2-210ENST00000416671 FGD1P98174 961 aa16.62■□□□□ 0.25
CHEK2-210ENST00000416671 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
CHEK2-210ENST00000416671 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
CHEK2-210ENST00000416671 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
CHEK2-210ENST00000416671 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
CHEK2-210ENST00000416671 ADCY5O95622 1261 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 AMOTQ4VCS5 1084 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 C17orf53Q8N3J3 647 aaPredicted RBP16.61■□□□□ 0.25
CHEK2-210ENST00000416671 PDCL2Q8N4E4 241 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 PDE1AP54750 535 aa16.61■□□□□ 0.25
CHEK2-210ENST00000416671 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
CHEK2-210ENST00000416671 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
CHEK2-210ENST00000416671 CUL4AQ13619 759 aa16.6■□□□□ 0.25
CHEK2-210ENST00000416671 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
CHEK2-210ENST00000416671 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
CHEK2-210ENST00000416671 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
CHEK2-210ENST00000416671 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
CHEK2-210ENST00000416671 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
CHEK2-210ENST00000416671 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
CHEK2-210ENST00000416671 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.25
CHEK2-210ENST00000416671 LMO7Q8WWI1 1683 aa16.58■□□□□ 0.25
CHEK2-210ENST00000416671 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.25
CHEK2-210ENST00000416671 USP48Q86UV5 1035 aa16.58■□□□□ 0.25
CHEK2-210ENST00000416671 COL18A1P39060 1754 aa16.58■□□□□ 0.24
CHEK2-210ENST00000416671 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
CHEK2-210ENST00000416671 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
CHEK2-210ENST00000416671 GDPD2Q9HCC8 539 aa16.58■□□□□ 0.24
CHEK2-210ENST00000416671 SLC39A6Q13433 755 aa16.57■□□□□ 0.24
CHEK2-210ENST00000416671 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
CHEK2-210ENST00000416671 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
CHEK2-210ENST00000416671 CCDC183Q5T5S1 534 aa16.57■□□□□ 0.24
CHEK2-210ENST00000416671 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
CHEK2-210ENST00000416671 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
CHEK2-210ENST00000416671 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
CHEK2-210ENST00000416671 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
CHEK2-210ENST00000416671 MX1P20591 662 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 ANKRD7Q92527 254 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 ADCY9O60503 1353 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
CHEK2-210ENST00000416671 SRGAP3O43295 1099 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 KDM4AO75164 1064 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
CHEK2-210ENST00000416671 MCCP23508 829 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 NOL8Q76FK4 1167 aaKnown RBP16.55■□□□□ 0.24
CHEK2-210ENST00000416671 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 SALL3Q9BXA9 1300 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
CHEK2-210ENST00000416671 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
CHEK2-210ENST00000416671 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
CHEK2-210ENST00000416671 HOXB7P09629 217 aa16.54■□□□□ 0.24
CHEK2-210ENST00000416671 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
CHEK2-210ENST00000416671 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
CHEK2-210ENST00000416671 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHEK2-210ENST00000416671 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
CHEK2-210ENST00000416671 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
CHEK2-210ENST00000416671 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
CHEK2-210ENST00000416671 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
CHEK2-210ENST00000416671 CPDO75976 1380 aa16.53■□□□□ 0.24
CHEK2-210ENST00000416671 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
CHEK2-210ENST00000416671 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
CHEK2-210ENST00000416671 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
CHEK2-210ENST00000416671 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 451.6 ms