RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 TJP1Q07157 1748 aa12.77□□□□□ -0.36
DEPDC4-203ENST00000416321 ARXQ96QS3 562 aa12.77□□□□□ -0.37
DEPDC4-203ENST00000416321 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
DEPDC4-203ENST00000416321 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
DEPDC4-203ENST00000416321 GNAI2P04899 355 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 MEIS3Q99687 375 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 MYD88Q99836 296 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
DEPDC4-203ENST00000416321 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
DEPDC4-203ENST00000416321 KDM2BQ8NHM5 1336 aa12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 HMMRO75330 724 aa12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 CRKLP46109 303 aaKnown RBP12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 HDAC1Q13547 482 aaPredicted RBP12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
DEPDC4-203ENST00000416321 TRIM37O94972 964 aa12.72□□□□□ -0.37
DEPDC4-203ENST00000416321 ITPK1Q13572 414 aa12.72□□□□□ -0.37
DEPDC4-203ENST00000416321 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
DEPDC4-203ENST00000416321 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 IGHDP01880 384 aa12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
DEPDC4-203ENST00000416321 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.38
DEPDC4-203ENST00000416321 LY75O60449 1722 aa12.71□□□□□ -0.38
DEPDC4-203ENST00000416321 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
DEPDC4-203ENST00000416321 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.38
DEPDC4-203ENST00000416321 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 A0A087WZG4 1122 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 NEURL1BA8MQ27 555 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 GRM8O00222 908 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 RREB1Q92766 1687 aa12.7□□□□□ -0.38
DEPDC4-203ENST00000416321 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 GCKRQ14397 625 aa12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 COL15A1P39059 1388 aa12.69□□□□□ -0.38
DEPDC4-203ENST00000416321 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 SLC27A3Q5K4L6 730 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 AK7Q96M32 723 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
DEPDC4-203ENST00000416321 KCNQ4P56696 695 aa12.67□□□□□ -0.38
DEPDC4-203ENST00000416321 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-203ENST00000416321 CCDC191Q8NCU4 936 aa12.67□□□□□ -0.38
DEPDC4-203ENST00000416321 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-203ENST00000416321 GNPATO15228 680 aa12.66□□□□□ -0.38
DEPDC4-203ENST00000416321 APBA3O96018 575 aa12.66□□□□□ -0.38
DEPDC4-203ENST00000416321 UTYO14607 1347 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 SMC5Q8IY18 1101 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms