RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 DEPDC5O75140 1603 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 KIF3BO15066 747 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 ARHGEF15O94989 841 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 GDF11O95390 407 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 PRICKLE2Q7Z3G6 844 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 GJD4Q96KN9 370 aaPredicted RBP7.28□□□□□ -1.24
PTPRK-210ENST00000415055 C1orf115Q9H7X2 142 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 SNRKQ9NRH2 765 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 XIRP1Q702N8 1843 aaKnown RBP7.28□□□□□ -1.24
PTPRK-210ENST00000415055 CCDC18Q5T9S5 1454 aa7.28□□□□□ -1.24
PTPRK-210ENST00000415055 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.24
PTPRK-210ENST00000415055 SRCAPQ6ZRS2 3230 aa7.27□□□□□ -1.24
PTPRK-210ENST00000415055 RAD21O60216 631 aa7.27□□□□□ -1.25
PTPRK-210ENST00000415055 FBXO45P0C2W1 286 aa7.27□□□□□ -1.25
PTPRK-210ENST00000415055 GPC1P35052 558 aa7.27□□□□□ -1.25
PTPRK-210ENST00000415055 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
PTPRK-210ENST00000415055 CUEDC1Q9NWM3 386 aaPredicted RBP7.27□□□□□ -1.25
PTPRK-210ENST00000415055 PLEKHH2Q8IVE3 1493 aa7.27□□□□□ -1.25
PTPRK-210ENST00000415055 PZPP20742 1482 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 CCNB3Q8WWL7 1395 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 MEN1O00255 615 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 ADAMTS2O95450 1211 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 RHOQP17081 205 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
PTPRK-210ENST00000415055 MCCD1P59942 119 aaPredicted RBP7.26□□□□□ -1.25
PTPRK-210ENST00000415055 ERVK-9P63128 1117 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 SRSF11Q05519 484 aaKnown RBP7.26□□□□□ -1.25
PTPRK-210ENST00000415055 RNF20Q5VTR2 975 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 GMCL1Q96IK5 515 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 KDM5DQ9BY66 1539 aa7.26□□□□□ -1.25
PTPRK-210ENST00000415055 GPATCH8Q9UKJ3 1502 aaKnown RBP7.26□□□□□ -1.25
PTPRK-210ENST00000415055 MED14O60244 1454 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 NLRP1Q9C000 1473 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 A0A1W2PRU2 124 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 PDIA4P13667 645 aaKnown RBP7.25□□□□□ -1.25
PTPRK-210ENST00000415055 MEX3CQ5U5Q3 659 aaKnown RBP7.25□□□□□ -1.25
PTPRK-210ENST00000415055 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 ZNF592Q92610 1267 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 POM121Q96HA1 1249 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 MIA2Q96PC5 1412 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 ROBO1Q9Y6N7 1651 aa7.25□□□□□ -1.25
PTPRK-210ENST00000415055 MAP3K10Q02779 954 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 NR1H3Q13133 447 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 GAS6Q14393 721 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 FOXR1Q6PIV2 292 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 LYPD4Q6UWN0 246 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 TRIM22Q8IYM9 498 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
PTPRK-210ENST00000415055 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 ARID3AQ99856 593 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 SERPINA10Q9UK55 444 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 ZNF330Q9Y3S2 320 aaPredicted RBP7.24□□□□□ -1.25
PTPRK-210ENST00000415055 CASKIN1Q8WXD9 1431 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 KIAA1107Q9UPP5 1409 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 PHLPP1O60346 1717 aa7.24□□□□□ -1.25
PTPRK-210ENST00000415055 ZC3H13Q5T200 1668 aaKnown RBP7.23□□□□□ -1.25
PTPRK-210ENST00000415055 SLC27A3Q5K4L6 730 aa7.23□□□□□ -1.25
PTPRK-210ENST00000415055 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
PTPRK-210ENST00000415055 PROSER2Q86WR7 435 aaPredicted RBP7.23□□□□□ -1.25
PTPRK-210ENST00000415055 SCARF2Q96GP6 870 aaPredicted RBP7.23□□□□□ -1.25
PTPRK-210ENST00000415055 DYRK1BQ9Y463 629 aa7.23□□□□□ -1.25
PTPRK-210ENST00000415055 ZNF644Q9H582 1327 aaPredicted RBP7.23□□□□□ -1.25
PTPRK-210ENST00000415055 DHX29Q7Z478 1369 aaKnown RBP7.22□□□□□ -1.25
PTPRK-210ENST00000415055 FAM135BQ49AJ0 1406 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 CELA2BP08218 269 aaPredicted RBP7.22□□□□□ -1.25
PTPRK-210ENST00000415055 IRS1P35568 1242 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 SUZ12Q15022 739 aaKnown RBP7.22□□□□□ -1.25
PTPRK-210ENST00000415055 KANK3Q6NY19 840 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 RIPOR1Q6ZS17 1223 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 MTMR14Q8NCE2 650 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 MBIPQ9NS73 344 aa7.22□□□□□ -1.25
PTPRK-210ENST00000415055 UBR1Q8IWV7 1749 aa7.21□□□□□ -1.25
PTPRK-210ENST00000415055 H7C1W4 665 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 POU4F2Q12837 409 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
PTPRK-210ENST00000415055 DBN1Q16643 649 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
PTPRK-210ENST00000415055 GRIP2Q9C0E4 1043 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 ENAMQ9NRM1 1142 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 EID1Q9Y6B2 187 aa7.21□□□□□ -1.26
PTPRK-210ENST00000415055 SCAF11Q99590 1463 aaKnown RBP7.21□□□□□ -1.26
PTPRK-210ENST00000415055 MTUS2Q5JR59 1369 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 FYCO1Q9BQS8 1478 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 ZBTB7CA1YPR0 619 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 GPR25O00155 361 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 SCTRP47872 440 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 CLN3Q13286 438 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 WWC1Q8IX03 1113 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 CCDC82Q8N4S0 544 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 GAS2L1Q99501 681 aaPredicted RBP7.2□□□□□ -1.26
PTPRK-210ENST00000415055 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
PTPRK-210ENST00000415055 NDUFB9Q9Y6M9 179 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 CEP152O94986 1710 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 TMEM94Q12767 1356 aa7.2□□□□□ -1.26
PTPRK-210ENST00000415055 SPATA31C2B4DYI2 1134 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms