RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
SMARCA4-202ENST00000413806 MICALCLQ6ZW33 695 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 PIK3C2GO75747 1445 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 ANKRD18BA2A2Z9 1011 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 GSDMDP57764 484 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 TTF1Q15361 905 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 STX1AQ16623 288 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 UBE2HP62256 183 aa15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-202ENST00000413806 A0A087WZG4 1122 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 TOP1P11387 765 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 PPP1R42Q7Z4L9 355 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 CTCFLQ8NI51 663 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 TAF4BQ92750 862 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 GOLGA8BA8MQT2 603 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 ANAPC15P60006 121 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 ATP10BO94823 1461 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 SNX21Q969T3 373 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 TEX13AQ9BXU3 409 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 MNAT1P51948 309 aa15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 RNF187Q5TA31 235 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-202ENST00000413806 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 SEPT7Q16181 437 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 ACEP12821 1306 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 KIF5CO60282 957 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 FKBP15Q5T1M5 1219 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 IQCA1Q86XH1 822 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 FSIP1Q8NA03 581 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
SMARCA4-202ENST00000413806 CASQ1P31415 396 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 USP5P45974 858 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 MCM3P25205 808 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 ZNF76P36508 570 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 MINDY4BA8MYZ0 360 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 SPA17Q15506 151 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 TSG101Q99816 390 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 LMAN1P49257 510 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 BMS1Q14692 1282 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 NEK1Q96PY6 1258 aa15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 ZSCAN16Q9H4T2 348 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-202ENST00000413806 FGFR1OPO95684 399 aaKnown RBP15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 KRT222Q8N1A0 295 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 RHPN1Q8TCX5 695 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 TRMT112Q9UI30 125 aaKnown RBP15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 PPP1R12BO60237 982 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 SDSP20132 328 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 CNNM3Q8NE01 707 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 PYM1Q9BRP8 204 aaKnown RBP15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 NF2P35240 595 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 RAB34Q9BZG1 259 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
SMARCA4-202ENST00000413806 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 IFIT3O14879 490 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 POLR3DP05423 398 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 CKAP2LQ8IYA6 745 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 TMX3Q96JJ7 454 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ZSCAN22P10073 491 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ZSCAN23Q3MJ62 389 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ZFYVE9O95405 1425 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 A2MP01023 1474 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 LRSAM1Q6UWE0 723 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ZSCAN29Q8IWY8 852 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 URI1O94763 535 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 GUCY1B3Q02153 619 aa15.86■□□□□ 0.13
SMARCA4-202ENST00000413806 ADCY5O95622 1261 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 ZFP91Q96JP5 570 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 CCDC94Q9BW85 323 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms