RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 COL15A1P39059 1388 aa11.04□□□□□ -0.64
AC004009.1-201ENST00000412413 NPHP1O15259 732 aa11.04□□□□□ -0.64
AC004009.1-201ENST00000412413 STARD3NLO95772 234 aa11.04□□□□□ -0.64
AC004009.1-201ENST00000412413 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
AC004009.1-201ENST00000412413 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 TTLL6Q8N841 843 aa11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 ZNF622Q969S3 477 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
AC004009.1-201ENST00000412413 A0A087WZG4 1122 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 H0YIN7 160 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 TIE1P35590 1138 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 ZNF496Q96IT1 587 aaPredicted RBP11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
AC004009.1-201ENST00000412413 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
AC004009.1-201ENST00000412413 TBC1D9BQ66K14 1250 aa11.01□□□□□ -0.65
AC004009.1-201ENST00000412413 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
AC004009.1-201ENST00000412413 MYH14Q7Z406 1995 aaKnown RBP11.01□□□□□ -0.65
AC004009.1-201ENST00000412413 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
AC004009.1-201ENST00000412413 KCNQ3O43525 872 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 A1BGP04217 495 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 LMNB1P20700 586 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 PRKAR2BP31323 418 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 PIP4K2AP48426 406 aaPredicted RBP11□□□□□ -0.65
AC004009.1-201ENST00000412413 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
AC004009.1-201ENST00000412413 FSTL1Q12841 308 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 ZNF790Q6PG37 636 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
AC004009.1-201ENST00000412413 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 TJP1Q07157 1748 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 KIAA1551Q9HCM1 1747 aa11□□□□□ -0.65
AC004009.1-201ENST00000412413 BTBD11A6QL63 1104 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 C21orf2O43822 256 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 PRELPP51888 382 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 HS6ST3Q8IZP7 471 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 SMC1BQ8NDV3 1235 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 CFAP53Q96M91 514 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 MRC1P22897 1456 aa10.99□□□□□ -0.65
AC004009.1-201ENST00000412413 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 U2AF1L5P0DN76 240 aaPredicted RBP10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 PDE6BP35913 854 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 U2AF1Q01081 240 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 TEX13AQ9BXU3 409 aaPredicted RBP10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 HEG1Q9ULI3 1381 aa10.98□□□□□ -0.65
AC004009.1-201ENST00000412413 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 NFKBIEO00221 500 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 PRR5LQ6MZQ0 368 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 MCM10Q7L590 875 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 DZIP3Q86Y13 1208 aaKnown RBP10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 RTF1Q92541 710 aaKnown RBP10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
AC004009.1-201ENST00000412413 PRAMEF22A3QJZ6 481 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 FAM177BA6PVY3 158 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 ST5P78524 1137 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 BRIP1Q9BX63 1249 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 USP16Q9Y5T5 823 aa10.96□□□□□ -0.65
AC004009.1-201ENST00000412413 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
AC004009.1-201ENST00000412413 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
AC004009.1-201ENST00000412413 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
AC004009.1-201ENST00000412413 RSPH6AQ9H0K4 717 aa10.95□□□□□ -0.66
AC004009.1-201ENST00000412413 SCN11AQ9UI33 1791 aa10.95□□□□□ -0.66
AC004009.1-201ENST00000412413 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
AC004009.1-201ENST00000412413 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
AC004009.1-201ENST00000412413 NBPF5PQ86XG9 351 aaPredicted RBP10.94□□□□□ -0.66
AC004009.1-201ENST00000412413 COL3A1P02461 1466 aaPredicted RBP10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 ADAMTS7Q9UKP4 1686 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 ASTLQ6HA08 431 aaPredicted RBP10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 TAOK3Q9H2K8 898 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 PDZRN3Q9UPQ7 1066 aa10.93□□□□□ -0.66
AC004009.1-201ENST00000412413 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 DDNO94850 711 aaPredicted RBP10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 STYK1Q6J9G0 422 aa10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 TRIM35Q9UPQ4 493 aa10.92□□□□□ -0.66
AC004009.1-201ENST00000412413 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms