RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 ZSCAN16Q9H4T2 348 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 FOSBP53539 338 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 TWISTNBQ3B726 338 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 MIPOL1Q8TD10 442 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 DNAJC5BQ9UF47 199 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 LACTBP83111 547 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 IGF1RP08069 1367 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 B4DLN1 442 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 IGHMBP2P38935 993 aaKnown RBP8.46□□□□□ -1.05
PTPN3-203ENST00000412145 PPP1R2P41236 205 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 MRPL12P52815 198 aaKnown RBP8.46□□□□□ -1.05
PTPN3-203ENST00000412145 IRX4P78413 519 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 ZBTB17Q13105 803 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.05
PTPN3-203ENST00000412145 AIDAQ96BJ3 306 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 AKNAQ7Z591 1439 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 PLIN1O60240 522 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 EFCAB5A4FU69 1503 aa8.46□□□□□ -1.05
PTPN3-203ENST00000412145 CASQ2O14958 399 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 ATP2B1P20020 1258 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 EBAG9O00559 213 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 NLRP6P59044 892 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 SNW1Q13573 536 aaKnown RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 MAATS1Q7Z4T9 603 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 CHD1LQ86WJ1 897 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 IQCA1Q86XH1 822 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 TMEM132EQ6IEE7 984 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 POTEDQ86YR6 584 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 CIB2O75838 187 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 PRPF31Q8WWY3 499 aaKnown RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-203ENST00000412145 CSRNP2Q9H175 543 aa8.46□□□□□ -1.06
PTPN3-203ENST00000412145 BACH2Q9BYV9 841 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 PRDM2Q13029 1718 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 PPFIA2O75334 1257 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 HOXA7P31268 230 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 KRT83P78385 493 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC38Q502W7 563 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 SNX16P57768 344 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 MAP3K21Q5TCX8 1036 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 TRIM7Q9C029 511 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 RABGAP1Q9Y3P9 1069 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 USP5P45974 858 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 GOLGA1Q92805 767 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 WDR78Q5VTH9 848 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 PHLDB2Q86SQ0 1253 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 RNF168Q8IYW5 571 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 PRG4Q92954 1404 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC194A0A1B0GVG4 234 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 URI1O94763 535 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 DZIP1Q86YF9 867 aaKnown RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 KIF1BPQ96EK5 621 aa8.45□□□□□ -1.06
PTPN3-203ENST00000412145 MTRF1LQ9UGC7 380 aaKnown RBP8.45□□□□□ -1.06
PTPN3-203ENST00000412145 TNNT1P13805 278 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 ANKLE2Q86XL3 938 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 FAM177A1Q8N128 213 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 C8orf76Q96K31 380 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 GAS8O95995 478 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 VCX3AQ9NNX9 186 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 CTAGE15A4D2H0 777 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 CTAGE8P0CG41 777 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 CFAP157Q5JU67 520 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 RPUSD2Q8IZ73 545 aaKnown RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 RAPGEF3O95398 923 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 MXRA7P84157 204 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 EHBP1L1Q8N3D4 1523 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 TDRD12Q587J7 1177 aaKnown RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 ABTB2Q8N961 1025 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 STMN2Q93045 179 aa8.44□□□□□ -1.06
PTPN3-203ENST00000412145 UTP14AQ9BVJ6 771 aaKnown RBP8.44□□□□□ -1.06
PTPN3-203ENST00000412145 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 ATP11AP98196 1134 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 RAI14Q9P0K7 980 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 GBP1P32455 592 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 LMAN1P49257 510 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms