RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 HYPKQ9NX55 129 aa19.9■□□□□ 0.78
TRAPPC12-203ENST00000411973 ERVV-1B6SEH8 477 aa19.89■□□□□ 0.77
TRAPPC12-203ENST00000411973 TM4SF1P30408 202 aa19.89■□□□□ 0.77
TRAPPC12-203ENST00000411973 TTLL7Q6ZT98 887 aa19.89■□□□□ 0.77
TRAPPC12-203ENST00000411973 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
TRAPPC12-203ENST00000411973 KIF6Q6ZMV9 814 aa19.88■□□□□ 0.77
TRAPPC12-203ENST00000411973 NUP98P52948 1817 aa19.88■□□□□ 0.77
TRAPPC12-203ENST00000411973 MMP10P09238 476 aa19.87■□□□□ 0.77
TRAPPC12-203ENST00000411973 COPS6Q7L5N1 327 aa19.87■□□□□ 0.77
TRAPPC12-203ENST00000411973 ZNF652Q9Y2D9 606 aa19.87■□□□□ 0.77
TRAPPC12-203ENST00000411973 XAGE3Q8WTP9 111 aa19.86■□□□□ 0.77
TRAPPC12-203ENST00000411973 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
TRAPPC12-203ENST00000411973 NFIXQ14938 502 aa19.85■□□□□ 0.77
TRAPPC12-203ENST00000411973 PPP1R1BQ9UD71 204 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-203ENST00000411973 DDR1Q08345 913 aa19.84■□□□□ 0.77
TRAPPC12-203ENST00000411973 HLFQ16534 295 aa19.84■□□□□ 0.77
TRAPPC12-203ENST00000411973 TBC1D9BQ66K14 1250 aa19.84■□□□□ 0.77
TRAPPC12-203ENST00000411973 PARP3Q9Y6F1 533 aa19.84■□□□□ 0.77
TRAPPC12-203ENST00000411973 POLRMTO00411 1230 aaKnown RBP19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 GIGYF2Q6Y7W6 1299 aaKnown RBP19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.77
TRAPPC12-203ENST00000411973 ATP10DQ9P241 1426 aa19.83■□□□□ 0.76
TRAPPC12-203ENST00000411973 AFDNP55196 1824 aaKnown RBP19.83■□□□□ 0.76
TRAPPC12-203ENST00000411973 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
TRAPPC12-203ENST00000411973 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
TRAPPC12-203ENST00000411973 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
TRAPPC12-203ENST00000411973 SETDB2Q96T68 719 aa19.82■□□□□ 0.76
TRAPPC12-203ENST00000411973 PHAXQ9H814 394 aaKnown RBP19.82■□□□□ 0.76
TRAPPC12-203ENST00000411973 TCERG1O14776 1098 aaKnown RBP19.81■□□□□ 0.76
TRAPPC12-203ENST00000411973 PLBD2Q8NHP8 589 aa19.81■□□□□ 0.76
TRAPPC12-203ENST00000411973 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
TRAPPC12-203ENST00000411973 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
TRAPPC12-203ENST00000411973 BICDL1Q6ZP65 573 aa19.8■□□□□ 0.76
TRAPPC12-203ENST00000411973 ANKRD36CQ5JPF3 1778 aa19.8■□□□□ 0.76
TRAPPC12-203ENST00000411973 HSP90AB3PQ58FF7 597 aa19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 ZNF34Q8IZ26 560 aa19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 FHDC1Q9C0D6 1143 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 NIP7Q9Y221 180 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 CD2APQ9Y5K6 639 aa19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 ARFGEF2Q9Y6D5 1785 aa19.79■□□□□ 0.76
TRAPPC12-203ENST00000411973 DDX58O95786 925 aaKnown RBP19.78■□□□□ 0.76
TRAPPC12-203ENST00000411973 SERPINB2P05120 415 aa19.78■□□□□ 0.76
TRAPPC12-203ENST00000411973 G2E3Q7L622 706 aa19.78■□□□□ 0.76
TRAPPC12-203ENST00000411973 SYT17Q9BSW7 474 aa19.78■□□□□ 0.76
TRAPPC12-203ENST00000411973 C10orf71Q711Q0 1435 aa19.77■□□□□ 0.76
TRAPPC12-203ENST00000411973 FLIIQ13045 1269 aa19.77■□□□□ 0.76
TRAPPC12-203ENST00000411973 TCIRG1Q13488 830 aa19.77■□□□□ 0.76
TRAPPC12-203ENST00000411973 ALDH1L2Q3SY69 923 aa19.76■□□□□ 0.75
TRAPPC12-203ENST00000411973 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
TRAPPC12-203ENST00000411973 RIC3Q7Z5B4 369 aa19.76■□□□□ 0.75
TRAPPC12-203ENST00000411973 PARP10Q53GL7 1025 aa19.75■□□□□ 0.75
TRAPPC12-203ENST00000411973 SSH1Q8WYL5 1049 aa19.75■□□□□ 0.75
TRAPPC12-203ENST00000411973 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
TRAPPC12-203ENST00000411973 IBTKQ9P2D0 1353 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 PI4KAP2A4QPH2 592 aa19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 GPTP24298 496 aa19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 PRR5LQ6MZQ0 368 aa19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 PI4KAP1Q8N8J0 262 aa19.74■□□□□ 0.75
TRAPPC12-203ENST00000411973 ADCY9O60503 1353 aa19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 TRIM28Q13263 835 aaKnown RBP19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 TPTE2Q6XPS3 522 aa19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 CNBD1Q8NA66 436 aa19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC12-203ENST00000411973 TGFB2P61812 414 aa19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 FKBP5Q13451 457 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 KIAA1551Q9HCM1 1747 aa19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 MAP3K2Q9Y2U5 619 aa19.72■□□□□ 0.75
TRAPPC12-203ENST00000411973 RARSP54136 660 aaKnown RBP19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 BRPF1P55201 1214 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 PPP1R42Q7Z4L9 355 aa19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 NLRP10Q86W26 655 aa19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 ANKRD31Q8N7Z5 1873 aa19.71■□□□□ 0.75
TRAPPC12-203ENST00000411973 NTSR2O95665 410 aa19.7■□□□□ 0.74
TRAPPC12-203ENST00000411973 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
TRAPPC12-203ENST00000411973 BRIP1Q9BX63 1249 aa19.7■□□□□ 0.74
TRAPPC12-203ENST00000411973 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
TRAPPC12-203ENST00000411973 ST5P78524 1137 aa19.69■□□□□ 0.74
TRAPPC12-203ENST00000411973 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
TRAPPC12-203ENST00000411973 MYD88Q99836 296 aa19.69■□□□□ 0.74
TRAPPC12-203ENST00000411973 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
TRAPPC12-203ENST00000411973 SMC4Q9NTJ3 1288 aa19.69■□□□□ 0.74
TRAPPC12-203ENST00000411973 PXDNLA1KZ92 1463 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 ATP5J2-PTCD1G3V325 749 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 BCL2L13Q9BXK5 485 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 PTPRCP08575 1304 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
TRAPPC12-203ENST00000411973 NPHP1O15259 732 aa19.67■□□□□ 0.74
TRAPPC12-203ENST00000411973 NEXNQ0ZGT2 675 aa19.67■□□□□ 0.74
TRAPPC12-203ENST00000411973 CCDC191Q8NCU4 936 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms