RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 HYPKQ9NX55 129 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 CD2APQ9Y5K6 639 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 MAP3K15Q6ZN16 1313 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 MMP10P09238 476 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 CT47B1P0C2W7 299 aaPredicted RBP10.6□□□□□ -0.71
RPE-204ENST00000411934 TM4SF1P30408 202 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
RPE-204ENST00000411934 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
RPE-204ENST00000411934 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
RPE-204ENST00000411934 FKBP8Q14318 412 aa10.59□□□□□ -0.71
RPE-204ENST00000411934 KRT24Q2M2I5 525 aa10.59□□□□□ -0.71
RPE-204ENST00000411934 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
RPE-204ENST00000411934 C8orf58Q8NAV2 365 aa10.59□□□□□ -0.71
RPE-204ENST00000411934 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
RPE-204ENST00000411934 SRP68Q9UHB9 627 aaKnown RBP10.59□□□□□ -0.71
RPE-204ENST00000411934 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
RPE-204ENST00000411934 SRCAPQ6ZRS2 3230 aa10.59□□□□□ -0.71
RPE-204ENST00000411934 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.71
RPE-204ENST00000411934 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.71
RPE-204ENST00000411934 RIC1Q4ADV7 1423 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 NUP98P52948 1817 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 POLRMTO00411 1230 aaKnown RBP10.58□□□□□ -0.72
RPE-204ENST00000411934 NFIXQ14938 502 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
RPE-204ENST00000411934 SMIM5Q71RC9 77 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
RPE-204ENST00000411934 STK31Q9BXU1 1019 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 CHPF2Q9P2E5 772 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 TBC1D2BQ9UPU7 963 aa10.58□□□□□ -0.72
RPE-204ENST00000411934 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
RPE-204ENST00000411934 AFDNP55196 1824 aaKnown RBP10.58□□□□□ -0.72
RPE-204ENST00000411934 MYL6BP14649 208 aa10.57□□□□□ -0.72
RPE-204ENST00000411934 SLFN5Q08AF3 891 aa10.57□□□□□ -0.72
RPE-204ENST00000411934 SYT17Q9BSW7 474 aa10.57□□□□□ -0.72
RPE-204ENST00000411934 FHDC1Q9C0D6 1143 aaPredicted RBP10.57□□□□□ -0.72
RPE-204ENST00000411934 KIAA1551Q9HCM1 1747 aa10.57□□□□□ -0.72
RPE-204ENST00000411934 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
RPE-204ENST00000411934 VAMP4O75379 141 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 DDX58O95786 925 aaKnown RBP10.56□□□□□ -0.72
RPE-204ENST00000411934 PIP4K2AP48426 406 aaPredicted RBP10.56□□□□□ -0.72
RPE-204ENST00000411934 TGFB2P61812 414 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
RPE-204ENST00000411934 DDR1Q08345 913 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 PROSER3Q2NL68 480 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 PARP10Q53GL7 1025 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 TSPYL6Q8N831 410 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 SETDB2Q96T68 719 aa10.56□□□□□ -0.72
RPE-204ENST00000411934 DLEC1Q9Y238 1755 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 SERPINB2P05120 415 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 HNRNPUQ00839 825 aaKnown RBP eCLIP10.55□□□□□ -0.72
RPE-204ENST00000411934 TBC1D9BQ66K14 1250 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 TTLL7Q6ZT98 887 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 COPS6Q7L5N1 327 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 XAGE3Q8WTP9 111 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
RPE-204ENST00000411934 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
RPE-204ENST00000411934 BRCA1P38398 1863 aaKnown RBP10.54□□□□□ -0.72
RPE-204ENST00000411934 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
RPE-204ENST00000411934 ZNF34Q8IZ26 560 aa10.54□□□□□ -0.72
RPE-204ENST00000411934 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
RPE-204ENST00000411934 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPE-204ENST00000411934 ST5P78524 1137 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 TRIM28Q13263 835 aaKnown RBP10.53□□□□□ -0.72
RPE-204ENST00000411934 TCIRG1Q13488 830 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 HLFQ16534 295 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 ALDH1L2Q3SY69 923 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 TPTE2Q6XPS3 522 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
RPE-204ENST00000411934 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 ANXA1P04083 346 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 PDE6BP35913 854 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
RPE-204ENST00000411934 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 NBPF5PQ86XG9 351 aaPredicted RBP10.52□□□□□ -0.73
RPE-204ENST00000411934 BRIP1Q9BX63 1249 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 ANKRD31Q8N7Z5 1873 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 UBN2Q6ZU65 1347 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 LAMB2P55268 1798 aa10.52□□□□□ -0.73
RPE-204ENST00000411934 KLRG2A4D1S0 409 aaPredicted RBP10.51□□□□□ -0.73
RPE-204ENST00000411934 SLC4A2P04920 1241 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
RPE-204ENST00000411934 AIMP1Q12904 312 aaKnown RBP10.51□□□□□ -0.73
RPE-204ENST00000411934 FLIIQ13045 1269 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 KSR2Q6VAB6 950 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 ISCA1Q9BUE6 129 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 PTPRCP08575 1304 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
RPE-204ENST00000411934 NPHP1O15259 732 aa10.5□□□□□ -0.73
RPE-204ENST00000411934 NTSR2O95665 410 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms