RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ATG14Q6ZNE5 492 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 VASH1Q7L8A9 365 aaPredicted RBP1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 Q8N1X5 172 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 RDH13Q8NBN7 331 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 LARP6Q9BRS8 491 aaKnown RBP1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 BSDC1Q9NW68 430 aaPredicted RBP1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 DPYSL4O14531 572 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 FOSL1P15407 271 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 KRTAP10-5P60370 271 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 POU4F2Q12837 409 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 GRIK5Q16478 980 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 EPHA10Q5JZY3 1008 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 ZNF362Q5T0B9 420 aaPredicted RBP1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 ZNF468Q5VIY5 522 aaPredicted RBP1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 FOXJ1Q92949 421 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 SHISA4Q96DD7 197 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 HHIPQ96QV1 700 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 C7orf69Q9H7B7 122 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 AKTIPQ9H8T0 292 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 TIMMDC1Q9NPL8 285 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 NPDC1Q9NQX5 325 aaPredicted RBP1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 STARD13Q9Y3M8 1113 aa1.01□□□□□ -2.25
RNU4-88P-201ENST00000411220 OTOL1A6NHN0 477 aaPredicted RBP1□□□□□ -2.25
RNU4-88P-201ENST00000411220 PPFIA2O75334 1257 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 SASH1O94885 1247 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 EGFRP00533 1210 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 RTN1Q16799 776 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 ZNF827Q17R98 1081 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 ZSWIM9Q86XI8 627 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 TRIM42Q8IWZ5 723 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 MDFIQ99750 246 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 RC3H2Q9HBD1 1191 aaKnown RBP1□□□□□ -2.25
RNU4-88P-201ENST00000411220 GPAMQ9HCL2 828 aa1□□□□□ -2.25
RNU4-88P-201ENST00000411220 WDR64B1ANS9 1081 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 TRIM13O60858 407 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 LILRB5O75023 590 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 FZD7O75084 574 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 GCGRP47871 477 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 PURAQ00577 322 aaKnown RBP0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 WDR44Q5JSH3 913 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 FAM182BQ5T319 152 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 NBPF14Q5TI25 921 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 IGF2-ASQ6U949 168 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 NBPF15Q8N660 670 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 FBXO15Q8NCQ5 510 aaPredicted RBP0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 FOXD4L4Q8WXT5 416 aaPredicted RBP0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 BDH2Q9BUT1 245 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 SMG5Q9UPR3 1016 aaKnown RBP0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 LEMD3Q9Y2U8 911 aa0.99□□□□□ -2.25
RNU4-88P-201ENST00000411220 HMX2A2RU54 273 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 MED14OSP0DP75 135 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 MFSD10Q14728 455 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 EFHC2Q5JST6 749 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 LIN37Q96GY3 246 aaPredicted RBP0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 TEPSINQ96N21 525 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 STRN4Q9NRL3 753 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 EVA1BQ9NVM1 165 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 ADGRG1Q9Y653 693 aa0.98□□□□□ -2.25
RNU4-88P-201ENST00000411220 C1QTNF3-AMACRE9PGA6 284 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 ADH1AP07327 375 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 GPC1P35052 558 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 KCNH2Q12809 1159 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 AGERQ15109 404 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 KCNMB1Q16558 191 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 LCE1CQ5T751 118 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 LCE1AQ5T7P2 110 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 LCE1BQ5T7P3 118 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 FAM117BQ6P1L5 589 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 CNOT11Q9UKZ1 510 aaKnown RBP0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 PRR12Q9ULL5 1215 aa0.97□□□□□ -2.25
RNU4-88P-201ENST00000411220 IKBKBO14920 756 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 GIGYF1O75420 1035 aaPredicted RBP0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 ALX3O95076 343 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 CSB-PGBD3P0DP91 1061 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 C4orf48Q5BLP8 95 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 DPY19L2P1Q6NXN4 242 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 C20orf204Q6ZNR8 217 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 PRR23BQ6ZRT6 265 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 DNAJC10Q8IXB1 793 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 PGBD3Q8N328 593 aa0.96□□□□□ -2.26
RNU4-88P-201ENST00000411220 ADARB2-AS1A8MUL3 147 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 ZBTB42B2RXF5 422 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 MS4A1P11836 297 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 MAGEA10P43363 369 aaPredicted RBP0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 TGFB2P61812 414 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 ADAM17P78536 824 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 FBXO11Q86XK2 927 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 GIMAP7Q8NHV1 300 aa0.95□□□□□ -2.26
RNU4-88P-201ENST00000411220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 K7ESM1 405 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 GLB1P16278 677 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 GLDCP23378 1020 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 VASPP50552 380 aaPredicted RBP0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 DHX9Q08211 1270 aaKnown RBP0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 KLF10Q13118 480 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 CRIP3Q6Q6R5 217 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 Q6ZS46 218 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 BPHLQ86WA6 291 aaPredicted RBP0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 DTWD1Q8N5C7 304 aa0.94□□□□□ -2.26
RNU4-88P-201ENST00000411220 WASF1Q92558 559 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms