RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 RC3H1Q5TC82 1133 aaKnown RBP25.92■■□□□ 1.74
CHKB-201ENST00000406938 PLBD2Q8NHP8 589 aa25.92■■□□□ 1.74
CHKB-201ENST00000406938 DDX19BQ9UMR2 479 aa25.92■■□□□ 1.74
CHKB-201ENST00000406938 ARFGEF2Q9Y6D5 1785 aa25.92■■□□□ 1.74
CHKB-201ENST00000406938 NUP188Q5SRE5 1749 aa25.92■■□□□ 1.74
CHKB-201ENST00000406938 ATP10DQ9P241 1426 aa25.91■■□□□ 1.74
CHKB-201ENST00000406938 COL15A1P39059 1388 aa25.91■■□□□ 1.74
CHKB-201ENST00000406938 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
CHKB-201ENST00000406938 KIF6Q6ZMV9 814 aa25.9■■□□□ 1.74
CHKB-201ENST00000406938 ZBTB3Q9H5J0 574 aa25.9■■□□□ 1.74
CHKB-201ENST00000406938 GNPATO15228 680 aa25.89■■□□□ 1.74
CHKB-201ENST00000406938 BEND3Q5T5X7 828 aa25.89■■□□□ 1.74
CHKB-201ENST00000406938 ARXQ96QS3 562 aa25.88■■□□□ 1.73
CHKB-201ENST00000406938 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
CHKB-201ENST00000406938 AK7Q96M32 723 aa25.88■■□□□ 1.73
CHKB-201ENST00000406938 METTL22Q9BUU2 404 aaPredicted RBP25.88■■□□□ 1.73
CHKB-201ENST00000406938 SRCIN1Q9C0H9 1055 aa25.88■■□□□ 1.73
CHKB-201ENST00000406938 MAP3K15Q6ZN16 1313 aa25.87■■□□□ 1.73
CHKB-201ENST00000406938 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
CHKB-201ENST00000406938 RPS6KA4O75676 772 aa25.86■■□□□ 1.73
CHKB-201ENST00000406938 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
CHKB-201ENST00000406938 ZBTB7BO15156 539 aaPredicted RBP25.85■■□□□ 1.73
CHKB-201ENST00000406938 NEXNQ0ZGT2 675 aa25.85■■□□□ 1.73
CHKB-201ENST00000406938 MYD88Q99836 296 aa25.85■■□□□ 1.73
CHKB-201ENST00000406938 EN1Q05925 392 aaPredicted RBP25.85■■□□□ 1.73
CHKB-201ENST00000406938 AMIGO3Q86WK7 504 aa25.85■■□□□ 1.73
CHKB-201ENST00000406938 LINS1Q8NG48 757 aa25.85■■□□□ 1.73
CHKB-201ENST00000406938 RTCBQ9Y3I0 505 aaKnown RBP25.85■■□□□ 1.73
CHKB-201ENST00000406938 HMGB2P26583 209 aaKnown RBP25.84■■□□□ 1.73
CHKB-201ENST00000406938 CWF19L2Q2TBE0 894 aaKnown RBP25.84■■□□□ 1.73
CHKB-201ENST00000406938 SMIM5Q71RC9 77 aa25.84■■□□□ 1.73
CHKB-201ENST00000406938 CAMKK2Q96RR4 588 aa25.84■■□□□ 1.73
CHKB-201ENST00000406938 A0A087WZG4 1122 aa25.83■■□□□ 1.73
CHKB-201ENST00000406938 IGKV5-2P06315 115 aa25.83■■□□□ 1.73
CHKB-201ENST00000406938 BAG6P46379 1132 aa25.83■■□□□ 1.73
CHKB-201ENST00000406938 EZH2Q15910 746 aaKnown RBP25.83■■□□□ 1.73
CHKB-201ENST00000406938 ALDH1L1O75891 902 aa25.82■■□□□ 1.72
CHKB-201ENST00000406938 MEIS3Q99687 375 aa25.82■■□□□ 1.72
CHKB-201ENST00000406938 CHMP4BQ9H444 224 aaKnown RBP25.82■■□□□ 1.72
CHKB-201ENST00000406938 ZBTB40Q9NUA8 1239 aa25.82■■□□□ 1.72
CHKB-201ENST00000406938 ERVV-1B6SEH8 477 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 AAMPQ13685 434 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 BCORQ6W2J9 1755 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 NEURL1BA8MQ27 555 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 CAMTA2O94983 1202 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 HLFQ16534 295 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 GIGYF2Q6Y7W6 1299 aaKnown RBP25.81■■□□□ 1.72
CHKB-201ENST00000406938 PPP4R2Q9NY27 417 aa25.81■■□□□ 1.72
CHKB-201ENST00000406938 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
CHKB-201ENST00000406938 ATP5J2-PTCD1G3V325 749 aa25.8■■□□□ 1.72
CHKB-201ENST00000406938 PHF14O94880 888 aa25.8■■□□□ 1.72
CHKB-201ENST00000406938 DEFB132Q7Z7B7 95 aa25.8■■□□□ 1.72
CHKB-201ENST00000406938 ZNF827Q17R98 1081 aa25.79■■□□□ 1.72
CHKB-201ENST00000406938 C4AP0C0L4 1744 aa25.78■■□□□ 1.72
CHKB-201ENST00000406938 TCIRG1Q13488 830 aa25.78■■□□□ 1.72
CHKB-201ENST00000406938 CCDC125Q86Z20 511 aa25.78■■□□□ 1.72
CHKB-201ENST00000406938 USP44Q9H0E7 712 aa25.78■■□□□ 1.72
CHKB-201ENST00000406938 IBTKQ9P2D0 1353 aaPredicted RBP25.78■■□□□ 1.72
CHKB-201ENST00000406938 AKT1S1Q96B36 256 aa25.77■■□□□ 1.72
CHKB-201ENST00000406938 AFDNP55196 1824 aaKnown RBP25.77■■□□□ 1.72
CHKB-201ENST00000406938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.77■■□□□ 1.72
CHKB-201ENST00000406938 ADRA2BP18089 450 aa25.77■■□□□ 1.72
CHKB-201ENST00000406938 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
CHKB-201ENST00000406938 ARHGEF1Q92888 912 aaKnown RBP25.77■■□□□ 1.72
CHKB-201ENST00000406938 ANKRD36CQ5JPF3 1778 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 SSFA2P28290 1259 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 GCKRQ14397 625 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 TRAPPC3LQ5T215 181 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 ISCA1Q9BUE6 129 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 C1orf115Q9H7X2 142 aa25.76■■□□□ 1.71
CHKB-201ENST00000406938 NUP98P52948 1817 aa25.75■■□□□ 1.71
CHKB-201ENST00000406938 GNAI3P08754 354 aa25.75■■□□□ 1.71
CHKB-201ENST00000406938 NARFQ9UHQ1 456 aa25.75■■□□□ 1.71
CHKB-201ENST00000406938 C9orf78Q9NZ63 289 aaPredicted RBP25.74■■□□□ 1.71
CHKB-201ENST00000406938 SRP68Q9UHB9 627 aaKnown RBP25.74■■□□□ 1.71
CHKB-201ENST00000406938 GRM8O00222 908 aa25.74■■□□□ 1.71
CHKB-201ENST00000406938 NBPF7P0C2Y1 421 aaPredicted RBP25.74■■□□□ 1.71
CHKB-201ENST00000406938 UBTFL1P0CB47 393 aaPredicted RBP25.74■■□□□ 1.71
CHKB-201ENST00000406938 CCDC191Q8NCU4 936 aa25.74■■□□□ 1.71
CHKB-201ENST00000406938 CWC25Q9NXE8 425 aaPredicted RBP25.74■■□□□ 1.71
CHKB-201ENST00000406938 TFCP2L1Q9NZI6 479 aa25.74■■□□□ 1.71
CHKB-201ENST00000406938 ZNF652Q9Y2D9 606 aa25.74■■□□□ 1.71
CHKB-201ENST00000406938 PCDHB15Q9Y5E8 787 aa25.74■■□□□ 1.71
CHKB-201ENST00000406938 USP42Q9H9J4 1324 aaKnown RBP25.73■■□□□ 1.71
CHKB-201ENST00000406938 ZPR1O75312 459 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 GPTP24298 496 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 RFC4P35249 363 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 USPL1Q5W0Q7 1092 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 B4GALNT3Q6L9W6 998 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 CCDC136Q96JN2 1154 aa25.73■■□□□ 1.71
CHKB-201ENST00000406938 RGL2O15211 777 aa25.72■■□□□ 1.71
CHKB-201ENST00000406938 TRIM28Q13263 835 aaKnown RBP25.72■■□□□ 1.71
CHKB-201ENST00000406938 ANO8Q9HCE9 1232 aaPredicted RBP25.72■■□□□ 1.71
CHKB-201ENST00000406938 TUBGCP6Q96RT7 1819 aa25.72■■□□□ 1.71
CHKB-201ENST00000406938 UTYO14607 1347 aa25.72■■□□□ 1.71
CHKB-201ENST00000406938 CLEC4GQ6UXB4 293 aa25.71■■□□□ 1.71
CHKB-201ENST00000406938 UBN2Q6ZU65 1347 aa25.71■■□□□ 1.71
CHKB-201ENST00000406938 GNAI2P04899 355 aa25.7■■□□□ 1.71
CHKB-201ENST00000406938 ZNF34Q8IZ26 560 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms