RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 GOLIM4O00461 696 aa16.96■□□□□ 0.3
PCNX4-203ENST00000406854 CNNM3Q8NE01 707 aa16.96■□□□□ 0.3
PCNX4-203ENST00000406854 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 CGNQ9P2M7 1197 aaKnown RBP16.95■□□□□ 0.3
PCNX4-203ENST00000406854 FANCAO15360 1455 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 KIAA0754O94854 1291 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
PCNX4-203ENST00000406854 FAM193AP78312 1265 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
PCNX4-203ENST00000406854 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
PCNX4-203ENST00000406854 KIF5CO60282 957 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 ORC3Q9UBD5 711 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-203ENST00000406854 CNPY2Q9Y2B0 182 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 ZKSCAN5Q9Y2L8 839 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 KDM5BQ9UGL1 1544 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-203ENST00000406854 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 TMC6Q7Z403 805 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 BRF1Q92994 677 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 CENPHQ9H3R5 247 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-203ENST00000406854 SLC12A7Q9Y666 1083 aa16.94■□□□□ 0.3
PCNX4-203ENST00000406854 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
PCNX4-203ENST00000406854 CCDC148Q8NFR7 591 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 ATP10BO94823 1461 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
PCNX4-203ENST00000406854 PPFIA3O75145 1194 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 NOLC1Q14978 699 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCNX4-203ENST00000406854 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
PCNX4-203ENST00000406854 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
PCNX4-203ENST00000406854 POLR3DP05423 398 aaPredicted RBP16.92■□□□□ 0.3
PCNX4-203ENST00000406854 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
PCNX4-203ENST00000406854 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
PCNX4-203ENST00000406854 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
PCNX4-203ENST00000406854 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
PCNX4-203ENST00000406854 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-203ENST00000406854 CASQ1P31415 396 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 HAND2P61296 217 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 MEX3CQ5U5Q3 659 aaKnown RBP16.91■□□□□ 0.3
PCNX4-203ENST00000406854 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 IARSP41252 1262 aaKnown RBP16.91■□□□□ 0.3
PCNX4-203ENST00000406854 JAKMIP3Q5VZ66 844 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-203ENST00000406854 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
PCNX4-203ENST00000406854 IQCA1Q86XH1 822 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 SNW1Q13573 536 aaKnown RBP16.9■□□□□ 0.3
PCNX4-203ENST00000406854 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 TAF3Q5VWG9 929 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
PCNX4-203ENST00000406854 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
PCNX4-203ENST00000406854 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 F13A1P00488 732 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
PCNX4-203ENST00000406854 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
PCNX4-203ENST00000406854 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
PCNX4-203ENST00000406854 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
PCNX4-203ENST00000406854 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
PCNX4-203ENST00000406854 SPA17Q15506 151 aa16.89■□□□□ 0.29
PCNX4-203ENST00000406854 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-203ENST00000406854 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
PCNX4-203ENST00000406854 RANBP6O60518 1105 aaKnown RBP16.89■□□□□ 0.29
PCNX4-203ENST00000406854 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
PCNX4-203ENST00000406854 HS1BP3Q53T59 392 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 TAF4BQ92750 862 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
PCNX4-203ENST00000406854 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 ANO6Q4KMQ2 910 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 CCDC102BQ68D86 513 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 ISM2Q6H9L7 571 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 MICU3Q86XE3 530 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 LDHAL6AQ6ZMR3 332 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 POLR3GO15318 223 aaPredicted RBP16.88■□□□□ 0.29
PCNX4-203ENST00000406854 USP26Q9BXU7 913 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
PCNX4-203ENST00000406854 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
PCNX4-203ENST00000406854 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 PLCH2O75038 1416 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
PCNX4-203ENST00000406854 CAVIN4Q5BKX8 364 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 BICDL1Q6ZP65 573 aa16.87■□□□□ 0.29
PCNX4-203ENST00000406854 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
PCNX4-203ENST00000406854 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms