RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
LIMK2-204ENST00000406516 FLIIQ13045 1269 aa18.63■□□□□ 0.57
LIMK2-204ENST00000406516 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
LIMK2-204ENST00000406516 ST18O60284 1047 aa18.62■□□□□ 0.57
LIMK2-204ENST00000406516 PKP1Q13835 747 aa18.62■□□□□ 0.57
LIMK2-204ENST00000406516 DDX49Q9Y6V7 483 aaKnown RBP18.61■□□□□ 0.57
LIMK2-204ENST00000406516 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
LIMK2-204ENST00000406516 CLEC17AQ6ZS10 378 aa18.61■□□□□ 0.57
LIMK2-204ENST00000406516 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
LIMK2-204ENST00000406516 TRIM37O94972 964 aa18.6■□□□□ 0.57
LIMK2-204ENST00000406516 NUCB2P80303 420 aa18.6■□□□□ 0.57
LIMK2-204ENST00000406516 MCTP1Q6DN14 999 aa18.6■□□□□ 0.57
LIMK2-204ENST00000406516 NFATC2IPQ8NCF5 419 aa18.6■□□□□ 0.57
LIMK2-204ENST00000406516 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
LIMK2-204ENST00000406516 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
LIMK2-204ENST00000406516 ZGPATQ8N5A5 531 aaKnown RBP18.6■□□□□ 0.57
LIMK2-204ENST00000406516 LRRCC1Q9C099 1032 aa18.59■□□□□ 0.57
LIMK2-204ENST00000406516 BCL9O00512 1426 aa18.59■□□□□ 0.57
LIMK2-204ENST00000406516 GNAI3P08754 354 aa18.58■□□□□ 0.57
LIMK2-204ENST00000406516 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.56
LIMK2-204ENST00000406516 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
LIMK2-204ENST00000406516 CABP4P57796 275 aa18.58■□□□□ 0.56
LIMK2-204ENST00000406516 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.56
LIMK2-204ENST00000406516 PIGBQ92521 554 aa18.58■□□□□ 0.56
LIMK2-204ENST00000406516 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
LIMK2-204ENST00000406516 SLC52A2Q9HAB3 445 aa18.57■□□□□ 0.56
LIMK2-204ENST00000406516 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
LIMK2-204ENST00000406516 MX1P20591 662 aa18.57■□□□□ 0.56
LIMK2-204ENST00000406516 LRRFIP2Q9Y608 721 aaKnown RBP18.57■□□□□ 0.56
LIMK2-204ENST00000406516 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 TEFQ10587 303 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
LIMK2-204ENST00000406516 TMOD3Q9NYL9 352 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 TOGARAM1Q9Y4F4 1720 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 TRIM6-TRIM34B2RNG4 842 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
LIMK2-204ENST00000406516 ATP8B2P98198 1209 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 RILPL2Q969X0 211 aa18.56■□□□□ 0.56
LIMK2-204ENST00000406516 NEK4P51957 841 aa18.55■□□□□ 0.56
LIMK2-204ENST00000406516 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
LIMK2-204ENST00000406516 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
LIMK2-204ENST00000406516 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
LIMK2-204ENST00000406516 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
LIMK2-204ENST00000406516 CLCN1P35523 988 aa18.54■□□□□ 0.56
LIMK2-204ENST00000406516 ASAP1Q9ULH1 1129 aa18.54■□□□□ 0.56
LIMK2-204ENST00000406516 DOT1LQ8TEK3 1739 aa18.53■□□□□ 0.56
LIMK2-204ENST00000406516 SLC39A6Q13433 755 aa18.53■□□□□ 0.56
LIMK2-204ENST00000406516 TRIM44Q96DX7 344 aaPredicted RBP18.53■□□□□ 0.56
LIMK2-204ENST00000406516 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
LIMK2-204ENST00000406516 LMBRD1Q9NUN5 540 aa18.53■□□□□ 0.56
LIMK2-204ENST00000406516 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
LIMK2-204ENST00000406516 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.56
LIMK2-204ENST00000406516 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
LIMK2-204ENST00000406516 USP44Q9H0E7 712 aa18.52■□□□□ 0.56
LIMK2-204ENST00000406516 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.56
LIMK2-204ENST00000406516 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.56
LIMK2-204ENST00000406516 KCNQ3O43525 872 aa18.52■□□□□ 0.55
LIMK2-204ENST00000406516 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.55
LIMK2-204ENST00000406516 PHAXQ9H814 394 aaKnown RBP18.52■□□□□ 0.55
LIMK2-204ENST00000406516 IL1RAPL2Q9NP60 686 aa18.52■□□□□ 0.55
LIMK2-204ENST00000406516 PALD1Q9ULE6 856 aa18.52■□□□□ 0.55
LIMK2-204ENST00000406516 ERBB4Q15303 1308 aa18.52■□□□□ 0.55
LIMK2-204ENST00000406516 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
LIMK2-204ENST00000406516 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
LIMK2-204ENST00000406516 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
LIMK2-204ENST00000406516 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
LIMK2-204ENST00000406516 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
LIMK2-204ENST00000406516 ESPNB1AK53 854 aa18.51■□□□□ 0.55
LIMK2-204ENST00000406516 CHMLP26374 656 aa18.51■□□□□ 0.55
LIMK2-204ENST00000406516 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
LIMK2-204ENST00000406516 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
LIMK2-204ENST00000406516 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
LIMK2-204ENST00000406516 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
LIMK2-204ENST00000406516 TMX3Q96JJ7 454 aa18.5■□□□□ 0.55
LIMK2-204ENST00000406516 APBA3O96018 575 aa18.5■□□□□ 0.55
LIMK2-204ENST00000406516 MCCP23508 829 aa18.5■□□□□ 0.55
LIMK2-204ENST00000406516 MRC1P22897 1456 aa18.49■□□□□ 0.55
LIMK2-204ENST00000406516 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
LIMK2-204ENST00000406516 ITGB4P16144 1822 aa18.49■□□□□ 0.55
LIMK2-204ENST00000406516 TUBGCP6Q96RT7 1819 aa18.48■□□□□ 0.55
LIMK2-204ENST00000406516 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
LIMK2-204ENST00000406516 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
LIMK2-204ENST00000406516 UPF1Q92900 1129 aaKnown RBP eCLIP18.48■□□□□ 0.55
LIMK2-204ENST00000406516 STAP2Q9UGK3 403 aa18.48■□□□□ 0.55
LIMK2-204ENST00000406516 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
LIMK2-204ENST00000406516 ZNF790Q6PG37 636 aa18.47■□□□□ 0.55
LIMK2-204ENST00000406516 NHSQ6T4R5 1651 aa18.47■□□□□ 0.55
LIMK2-204ENST00000406516 NAP1L5Q96NT1 182 aaPredicted RBP18.47■□□□□ 0.55
LIMK2-204ENST00000406516 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
LIMK2-204ENST00000406516 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
LIMK2-204ENST00000406516 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
LIMK2-204ENST00000406516 PTCD1O75127 700 aaKnown RBP18.47■□□□□ 0.55
LIMK2-204ENST00000406516 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
LIMK2-204ENST00000406516 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
LIMK2-204ENST00000406516 KCNQ4P56696 695 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 ZNF445P59923 1031 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 GPT2Q8TD30 523 aa18.46■□□□□ 0.55
LIMK2-204ENST00000406516 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms