RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 KLHDC4Q8TBB5 520 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 RUFY2Q8WXA3 655 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 SPATA32Q96LK8 384 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 MAP2P11137 1827 aaKnown RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 H3BQV1 296 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 KRT85P78386 507 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 TEFQ10587 303 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 COL9A3Q14050 684 aaPredicted RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 ARAP3Q8WWN8 1544 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 ZNF771Q7L3S4 317 aaPredicted RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 ERCC4Q92889 916 aaPredicted RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 PRIMPOLQ96LW4 560 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 LSG1Q9H089 658 aaKnown RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 TRMT1Q9NXH9 659 aaKnown RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 MTMR6Q9Y217 621 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 RAD50Q92878 1312 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 EDC3Q96F86 508 aaKnown RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 RPAP1Q9BWH6 1393 aaPredicted RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 LGR6Q9HBX8 967 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 KNDC1Q76NI1 1749 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 FRMPD1Q5SYB0 1578 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 TTC6Q86TZ1 520 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 DNAJC25Q9H1X3 360 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 HYPKQ9NX55 129 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
HPS4-203ENST00000402105 PI4K2BQ8TCG2 481 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 KCNF1Q9H3M0 494 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 TPCN1Q9ULQ1 816 aa10.91□□□□□ -0.66
HPS4-203ENST00000402105 TYRO3Q06418 890 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 GPATCH3Q96I76 525 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 PIK3C2BO00750 1634 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
HPS4-203ENST00000402105 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 FMNL2Q96PY5 1086 aa10.9□□□□□ -0.66
HPS4-203ENST00000402105 ALKQ9UM73 1620 aa10.9□□□□□ -0.67
HPS4-203ENST00000402105 GOLGA6L19H0YKK7 550 aa10.9□□□□□ -0.67
HPS4-203ENST00000402105 TNNT1P13805 278 aa10.9□□□□□ -0.67
HPS4-203ENST00000402105 BLOC1S2Q6QNY1 142 aa10.9□□□□□ -0.67
HPS4-203ENST00000402105 STAP2Q9UGK3 403 aa10.9□□□□□ -0.67
HPS4-203ENST00000402105 CDK12Q9NYV4 1490 aaPredicted RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 G3BP1Q13283 466 aaKnown RBP eCLIP10.89□□□□□ -0.67
HPS4-203ENST00000402105 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 SMAP1Q8IYB5 467 aaPredicted RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 NEURL4Q96JN8 1562 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 BECN2A8MW95 431 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 SSH3Q8TE77 659 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
HPS4-203ENST00000402105 ECHDC1Q9NTX5 307 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
HPS4-203ENST00000402105 KIAA1524Q8TCG1 905 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 JAK2O60674 1132 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 MYL6BP14649 208 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 ZNF165P49910 485 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 CREB3L3Q68CJ9 461 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 CLIP2Q9UDT6 1046 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 SIGLEC1Q9BZZ2 1709 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 FAM200AQ8TCP9 573 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 ZBTB9Q96C00 473 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 TTC14Q96N46 770 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 CBX8Q9HC52 389 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 CRB1P82279 1406 aa10.88□□□□□ -0.67
HPS4-203ENST00000402105 PRAMEF22A3QJZ6 481 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 BTBD11A6QL63 1104 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 CHGBP05060 677 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 ATP7BP35670 1465 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 CPSF1Q10570 1443 aaKnown RBP10.87□□□□□ -0.67
HPS4-203ENST00000402105 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
HPS4-203ENST00000402105 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
HPS4-203ENST00000402105 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 NR1I2O75469 434 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 CCDC112Q8NEF3 446 aa10.87□□□□□ -0.67
HPS4-203ENST00000402105 LRRC59Q96AG4 307 aaKnown RBP10.87□□□□□ -0.67
HPS4-203ENST00000402105 HSP90AB4PQ58FF6 505 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 CCT2P78371 535 aaKnown RBP10.86□□□□□ -0.67
HPS4-203ENST00000402105 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
HPS4-203ENST00000402105 FTOQ9C0B1 505 aaKnown RBP eCLIP10.86□□□□□ -0.67
HPS4-203ENST00000402105 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
HPS4-203ENST00000402105 ZRSR1Q15695 479 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms