RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 C2CD5Q86YS7 1000 aa31.61■■■□□ 2.65
RSPO4-202ENST00000400634 NUP98P52948 1817 aa31.61■■■□□ 2.65
RSPO4-202ENST00000400634 ERVV-1B6SEH8 477 aa31.58■■■□□ 2.65
RSPO4-202ENST00000400634 CHL1O00533 1208 aa31.58■■■□□ 2.65
RSPO4-202ENST00000400634 KIF6Q6ZMV9 814 aa31.58■■■□□ 2.65
RSPO4-202ENST00000400634 TTLL6Q8N841 843 aa31.58■■■□□ 2.65
RSPO4-202ENST00000400634 NBPF5PQ86XG9 351 aaPredicted RBP31.57■■■□□ 2.64
RSPO4-202ENST00000400634 NGEFQ8N5V2 710 aa31.57■■■□□ 2.64
RSPO4-202ENST00000400634 NIP7Q9Y221 180 aaKnown RBP eCLIP31.57■■■□□ 2.64
RSPO4-202ENST00000400634 MYL6BP14649 208 aa31.56■■■□□ 2.64
RSPO4-202ENST00000400634 MAP3K15Q6ZN16 1313 aa31.55■■■□□ 2.64
RSPO4-202ENST00000400634 ANP32CO43423 234 aa31.55■■■□□ 2.64
RSPO4-202ENST00000400634 LAS1LQ9Y4W2 734 aaKnown RBP31.55■■■□□ 2.64
RSPO4-202ENST00000400634 COL11A2P13942 1736 aaPredicted RBP31.55■■■□□ 2.64
RSPO4-202ENST00000400634 APAF1O14727 1248 aa31.54■■■□□ 2.64
RSPO4-202ENST00000400634 EIF2S2P20042 333 aaKnown RBP31.54■■■□□ 2.64
RSPO4-202ENST00000400634 TPTE2Q6XPS3 522 aa31.54■■■□□ 2.64
RSPO4-202ENST00000400634 SBF1O95248 1867 aa31.54■■■□□ 2.64
RSPO4-202ENST00000400634 HLFQ16534 295 aa31.53■■■□□ 2.64
RSPO4-202ENST00000400634 GPBP1L1Q9HC44 474 aaPredicted RBP31.53■■■□□ 2.64
RSPO4-202ENST00000400634 CALD1Q05682 793 aaKnown RBP31.52■■■□□ 2.64
RSPO4-202ENST00000400634 CCDC24Q8N4L8 307 aa31.52■■■□□ 2.64
RSPO4-202ENST00000400634 CFAP44Q96MT7 982 aa31.52■■■□□ 2.64
RSPO4-202ENST00000400634 ZNF622Q969S3 477 aaKnown RBP eCLIP31.51■■■□□ 2.63
RSPO4-202ENST00000400634 TTLL7Q6ZT98 887 aa31.5■■■□□ 2.63
RSPO4-202ENST00000400634 CACNA1SQ13698 1873 aa31.48■■■□□ 2.63
RSPO4-202ENST00000400634 ARFGEF2Q9Y6D5 1785 aa31.48■■■□□ 2.63
RSPO4-202ENST00000400634 HOXB7P09629 217 aa31.48■■■□□ 2.63
RSPO4-202ENST00000400634 NYXQ9GZU5 481 aa31.48■■■□□ 2.63
RSPO4-202ENST00000400634 PDIA6Q15084 440 aa31.47■■■□□ 2.63
RSPO4-202ENST00000400634 STYK1Q6J9G0 422 aa31.47■■■□□ 2.63
RSPO4-202ENST00000400634 CNKSR1Q969H4 720 aa31.47■■■□□ 2.63
RSPO4-202ENST00000400634 SRGNP10124 158 aa31.46■■■□□ 2.63
RSPO4-202ENST00000400634 GTF2E1P29083 439 aaPredicted RBP31.46■■■□□ 2.63
RSPO4-202ENST00000400634 CCDC184Q52MB2 194 aa31.46■■■□□ 2.63
RSPO4-202ENST00000400634 C9orf131Q5VYM1 1079 aa31.46■■■□□ 2.63
RSPO4-202ENST00000400634 ZNF526Q8TF50 670 aaPredicted RBP31.46■■■□□ 2.63
RSPO4-202ENST00000400634 MASTLQ96GX5 879 aa31.46■■■□□ 2.63
RSPO4-202ENST00000400634 ZBTB3Q9H5J0 574 aa31.46■■■□□ 2.63
RSPO4-202ENST00000400634 C1QTNF8P60827 252 aa31.45■■■□□ 2.63
RSPO4-202ENST00000400634 LRP10Q7Z4F1 713 aa31.45■■■□□ 2.63
RSPO4-202ENST00000400634 IFT57Q9NWB7 429 aa31.45■■■□□ 2.63
RSPO4-202ENST00000400634 CCDC88AQ3V6T2 1871 aa31.44■■■□□ 2.62
RSPO4-202ENST00000400634 GIGYF2Q6Y7W6 1299 aaKnown RBP31.44■■■□□ 2.62
RSPO4-202ENST00000400634 MRS2Q9HD23 443 aa31.44■■■□□ 2.62
RSPO4-202ENST00000400634 IBTKQ9P2D0 1353 aaPredicted RBP31.43■■■□□ 2.62
RSPO4-202ENST00000400634 FAM177BA6PVY3 158 aa31.43■■■□□ 2.62
RSPO4-202ENST00000400634 GNAI1P63096 354 aa31.43■■■□□ 2.62
RSPO4-202ENST00000400634 SLX4Q8IY92 1834 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 ZNF853P0CG23 659 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 KRT24Q2M2I5 525 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 PROSER3Q2NL68 480 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 NECTIN2Q92692 538 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 DDX21Q9NR30 783 aaKnown RBP eCLIP31.42■■■□□ 2.62
RSPO4-202ENST00000400634 MBIPQ9NS73 344 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 RNF181Q9P0P0 153 aa31.42■■■□□ 2.62
RSPO4-202ENST00000400634 KLRG2A4D1S0 409 aaPredicted RBP31.41■■■□□ 2.62
RSPO4-202ENST00000400634 FER1L6Q2WGJ9 1857 aa31.41■■■□□ 2.62
RSPO4-202ENST00000400634 ANKRD36CQ5JPF3 1778 aa31.4■■■□□ 2.62
RSPO4-202ENST00000400634 ANXA1P04083 346 aa31.4■■■□□ 2.62
RSPO4-202ENST00000400634 NPR1P16066 1061 aa31.4■■■□□ 2.62
RSPO4-202ENST00000400634 HDGFL1Q5TGJ6 251 aa31.4■■■□□ 2.62
RSPO4-202ENST00000400634 ZNF34Q8IZ26 560 aa31.4■■■□□ 2.62
RSPO4-202ENST00000400634 GPTP24298 496 aa31.39■■■□□ 2.62
RSPO4-202ENST00000400634 SOGA3Q5TF21 947 aa31.39■■■□□ 2.62
RSPO4-202ENST00000400634 LMNB1P20700 586 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 RASSF7Q02833 373 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 PARP10Q53GL7 1025 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 HSP90AB3PQ58FF7 597 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 DUSP27Q5VZP5 1158 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 PRPF40BQ6NWY9 871 aaKnown RBP31.38■■■□□ 2.61
RSPO4-202ENST00000400634 COPS6Q7L5N1 327 aa31.38■■■□□ 2.61
RSPO4-202ENST00000400634 ZC3H4Q9UPT8 1303 aaKnown RBP31.38■■■□□ 2.61
RSPO4-202ENST00000400634 C21orf2O43822 256 aa31.37■■■□□ 2.61
RSPO4-202ENST00000400634 PPP1R42Q7Z4L9 355 aa31.37■■■□□ 2.61
RSPO4-202ENST00000400634 UBN2Q6ZU65 1347 aa31.37■■■□□ 2.61
RSPO4-202ENST00000400634 CCDC27Q2M243 656 aa31.36■■■□□ 2.61
RSPO4-202ENST00000400634 XAGE3Q8WTP9 111 aa31.36■■■□□ 2.61
RSPO4-202ENST00000400634 CHPF2Q9P2E5 772 aa31.36■■■□□ 2.61
RSPO4-202ENST00000400634 DBF4Q9UBU7 674 aaPredicted RBP31.36■■■□□ 2.61
RSPO4-202ENST00000400634 RIC1Q4ADV7 1423 aa31.35■■■□□ 2.61
RSPO4-202ENST00000400634 AIMP1Q12904 312 aaKnown RBP31.35■■■□□ 2.61
RSPO4-202ENST00000400634 NUTM1Q86Y26 1132 aa31.35■■■□□ 2.61
RSPO4-202ENST00000400634 DICER1Q9UPY3 1922 aaKnown RBP31.35■■■□□ 2.61
RSPO4-202ENST00000400634 NCBP3Q53F19 620 aaKnown RBP31.34■■■□□ 2.61
RSPO4-202ENST00000400634 SUSD4Q5VX71 490 aa31.34■■■□□ 2.61
RSPO4-202ENST00000400634 TNRC6CQ9HCJ0 1690 aaKnown RBP31.34■■■□□ 2.61
RSPO4-202ENST00000400634 ABCC12Q96J65 1359 aa31.33■■■□□ 2.61
RSPO4-202ENST00000400634 NFKBIEO00221 500 aa31.33■■■□□ 2.61
RSPO4-202ENST00000400634 ALDH1B1P30837 517 aa31.33■■■□□ 2.61
RSPO4-202ENST00000400634 ERFEQ4G0M1 354 aa31.33■■■□□ 2.61
RSPO4-202ENST00000400634 CHMP4AQ9BY43 222 aa31.33■■■□□ 2.61
RSPO4-202ENST00000400634 ZNF219Q9P2Y4 722 aaPredicted RBP31.33■■■□□ 2.61
RSPO4-202ENST00000400634 KDM2BQ8NHM5 1336 aa31.32■■■□□ 2.6
RSPO4-202ENST00000400634 HYPKQ9NX55 129 aa31.32■■■□□ 2.6
RSPO4-202ENST00000400634 TIAM2Q8IVF5 1701 aa31.32■■■□□ 2.6
RSPO4-202ENST00000400634 LTBP3Q9NS15 1303 aa31.31■■■□□ 2.6
RSPO4-202ENST00000400634 CRY2Q49AN0 593 aa31.31■■■□□ 2.6
RSPO4-202ENST00000400634 RNF123Q5XPI4 1314 aa31.3■■■□□ 2.6
RSPO4-202ENST00000400634 NTSR2O95665 410 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms