RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
PTPN6-202ENST00000399448 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
PTPN6-202ENST00000399448 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
PTPN6-202ENST00000399448 DCCP43146 1447 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 KAZALD1Q96I82 304 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.25
PTPN6-202ENST00000399448 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.25
PTPN6-202ENST00000399448 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
PTPN6-202ENST00000399448 BRD1O95696 1058 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 ABCC6O95255 1503 aa16.58■□□□□ 0.24
PTPN6-202ENST00000399448 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 CWC27Q6UX04 472 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 IGKV5-2P06315 115 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 ZNF445P59923 1031 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
PTPN6-202ENST00000399448 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
PTPN6-202ENST00000399448 COL18A1P39060 1754 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
PTPN6-202ENST00000399448 NOL8Q76FK4 1167 aaKnown RBP16.56■□□□□ 0.24
PTPN6-202ENST00000399448 AACSQ86V21 672 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 MEGF6O75095 1541 aa16.56■□□□□ 0.24
PTPN6-202ENST00000399448 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 SASH1O94885 1247 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 MYL6BP14649 208 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
PTPN6-202ENST00000399448 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-202ENST00000399448 GCKRQ14397 625 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 TTC14Q96N46 770 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
PTPN6-202ENST00000399448 C5P01031 1676 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 HIP1O00291 1037 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 CYP27B1O15528 508 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FOXD4L5Q5VV16 416 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FOXD4L4Q8WXT5 416 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-202ENST00000399448 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 MYD88Q99836 296 aa16.53■□□□□ 0.24
PTPN6-202ENST00000399448 MRC1P22897 1456 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 LRP10Q7Z4F1 713 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 KCNB2Q92953 911 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
PTPN6-202ENST00000399448 SPATA31A3Q5VYP0 1347 aa16.52■□□□□ 0.23
PTPN6-202ENST00000399448 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
PTPN6-202ENST00000399448 CPDO75976 1380 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 MBD3O95983 291 aa16.51■□□□□ 0.23
PTPN6-202ENST00000399448 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-202ENST00000399448 AK2P54819 239 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 PTH1RQ03431 593 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 TM6SF1Q9BZW5 370 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
PTPN6-202ENST00000399448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
PTPN6-202ENST00000399448 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CABP4P57796 275 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
PTPN6-202ENST00000399448 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
PTPN6-202ENST00000399448 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
PTPN6-202ENST00000399448 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 SIL1Q9H173 461 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
PTPN6-202ENST00000399448 PPP1R9BQ96SB3 815 aa16.48■□□□□ 0.23
PTPN6-202ENST00000399448 ZSWIM6Q9HCJ5 1215 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms