RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 TAF6LQ9Y6J9 622 aa17.83■□□□□ 0.44
PFKL-202ENST00000397961 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 GIMAP6Q6P9H5 292 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 SNRKQ9NRH2 765 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 RNMTO43148 476 aaKnown RBP17.82■□□□□ 0.44
PFKL-202ENST00000397961 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
PFKL-202ENST00000397961 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
PFKL-202ENST00000397961 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
PFKL-202ENST00000397961 DNM1Q05193 864 aaKnown RBP17.81■□□□□ 0.44
PFKL-202ENST00000397961 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
PFKL-202ENST00000397961 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
PFKL-202ENST00000397961 GUCY1B3Q02153 619 aa17.81■□□□□ 0.44
PFKL-202ENST00000397961 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
PFKL-202ENST00000397961 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
PFKL-202ENST00000397961 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
PFKL-202ENST00000397961 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
PFKL-202ENST00000397961 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
PFKL-202ENST00000397961 GOLGA6L4A6NEF3 574 aa17.8■□□□□ 0.44
PFKL-202ENST00000397961 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
PFKL-202ENST00000397961 GJB2P29033 226 aa17.8■□□□□ 0.44
PFKL-202ENST00000397961 NMIQ13287 307 aaPredicted RBP17.8■□□□□ 0.44
PFKL-202ENST00000397961 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
PFKL-202ENST00000397961 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 EPHA10Q5JZY3 1008 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 GIGYF1O75420 1035 aaPredicted RBP17.79■□□□□ 0.44
PFKL-202ENST00000397961 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
PFKL-202ENST00000397961 ATF3P18847 181 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
PFKL-202ENST00000397961 PI4K2BQ8TCG2 481 aa17.78■□□□□ 0.44
PFKL-202ENST00000397961 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
PFKL-202ENST00000397961 A0A087WZG4 1122 aa17.78■□□□□ 0.44
PFKL-202ENST00000397961 GRM8O00222 908 aa17.78■□□□□ 0.44
PFKL-202ENST00000397961 SYT1P21579 422 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 AKAP4Q5JQC9 854 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 RBM8AQ9Y5S9 174 aaKnown RBP17.77■□□□□ 0.44
PFKL-202ENST00000397961 SGSM2O43147 1006 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 TIMM10P62072 90 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 KNDC1Q76NI1 1749 aa17.77■□□□□ 0.44
PFKL-202ENST00000397961 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.43
PFKL-202ENST00000397961 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.43
PFKL-202ENST00000397961 A0A087WWV3 80 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 A0A0D9SFI3 127 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 TSC1Q92574 1164 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
PFKL-202ENST00000397961 KSR2Q6VAB6 950 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.76■□□□□ 0.43
PFKL-202ENST00000397961 CABP4P57796 275 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.436e-7■■□□□ 11.8
PFKL-202ENST00000397961 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
PFKL-202ENST00000397961 CCT2P78371 535 aaKnown RBP17.75■□□□□ 0.43
PFKL-202ENST00000397961 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
PFKL-202ENST00000397961 KCNH5Q8NCM2 988 aa17.75■□□□□ 0.43
PFKL-202ENST00000397961 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
PFKL-202ENST00000397961 STX6O43752 255 aa17.75■□□□□ 0.43
PFKL-202ENST00000397961 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
PFKL-202ENST00000397961 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
PFKL-202ENST00000397961 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
PFKL-202ENST00000397961 HAND2P61296 217 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 TFCP2Q12800 502 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
PFKL-202ENST00000397961 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 A1BGP04217 495 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 DRC7Q8IY82 874 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 ERCC4Q92889 916 aaPredicted RBP17.74■□□□□ 0.43
PFKL-202ENST00000397961 TSPY26PQ9H489 355 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
PFKL-202ENST00000397961 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
PFKL-202ENST00000397961 SASH1O94885 1247 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 CLCN1P35523 988 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 GOLIM4O00461 696 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 GPTP24298 496 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 HSPA4P34932 840 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
PFKL-202ENST00000397961 LMBR1LQ6UX01 489 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 DBNDD2Q9BQY9 259 aa17.73■□□□□ 0.43
PFKL-202ENST00000397961 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
PFKL-202ENST00000397961 OSBPL3Q9H4L5 887 aa17.72■□□□□ 0.43
PFKL-202ENST00000397961 ADCY9O60503 1353 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 ME3Q16798 604 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
PFKL-202ENST00000397961 BRD1O95696 1058 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 PRDM11Q9NQV5 511 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
PFKL-202ENST00000397961 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 JAK2O60674 1132 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
PFKL-202ENST00000397961 BLOC1S2Q6QNY1 142 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms