RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 KRT32Q14532 448 aa18.28■□□□□ 0.52
LSS-202ENST00000397728 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
LSS-202ENST00000397728 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
LSS-202ENST00000397728 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
LSS-202ENST00000397728 ARAP3Q8WWN8 1544 aa18.27■□□□□ 0.52
LSS-202ENST00000397728 F8W031 263 aaPredicted RBP18.27■□□□□ 0.51
LSS-202ENST00000397728 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.51
LSS-202ENST00000397728 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
LSS-202ENST00000397728 HELBQ8NG08 1087 aaPredicted RBP18.26■□□□□ 0.51
LSS-202ENST00000397728 TSHZ3Q63HK5 1081 aa18.26■□□□□ 0.51
LSS-202ENST00000397728 RANBP6O60518 1105 aaKnown RBP18.26■□□□□ 0.51
LSS-202ENST00000397728 FAM89AQ96GI7 184 aa18.26■□□□□ 0.51
LSS-202ENST00000397728 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
LSS-202ENST00000397728 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 TPM2P07951 284 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
LSS-202ENST00000397728 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 BAG3O95817 575 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
LSS-202ENST00000397728 PDRG1Q9NUG6 133 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
LSS-202ENST00000397728 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
LSS-202ENST00000397728 RXRBP28702 533 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 ZNF772Q68DY9 489 aaPredicted RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 WDHD1O75717 1129 aaPredicted RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 PDE4CQ08493 712 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 UQCRFS1P1P0C7P4 283 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 CEBPZQ03701 1054 aaKnown RBP18.24■□□□□ 0.51
LSS-202ENST00000397728 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
LSS-202ENST00000397728 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 CDC42BPAQ5VT25 1732 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 MYO1BO43795 1136 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 IL15P40933 162 aaPredicted RBP18.23■□□□□ 0.51
LSS-202ENST00000397728 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
LSS-202ENST00000397728 SLC4A8Q2Y0W8 1093 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
LSS-202ENST00000397728 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
LSS-202ENST00000397728 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
LSS-202ENST00000397728 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 PCMTD1Q96MG8 357 aaPredicted RBP18.22■□□□□ 0.51
LSS-202ENST00000397728 TSR1Q2NL82 804 aaKnown RBP18.22■□□□□ 0.51
LSS-202ENST00000397728 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
LSS-202ENST00000397728 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 ZNF213O14771 459 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 PHKG2P15735 406 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 CDK5RAP3Q96JB5 506 aa18.22■□□□□ 0.51
LSS-202ENST00000397728 G2E3Q7L622 706 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 EVI5LQ96CN4 794 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 KDM5CP41229 1560 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 IQCA1Q86XH1 822 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
LSS-202ENST00000397728 ANKRD20A12PQ8NF67 263 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 FEZ1Q99689 392 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 CDKL5O76039 1030 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 A2ML1A8K2U0 1454 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 STK38Q15208 465 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 INSRP06213 1382 aa18.2■□□□□ 0.5
LSS-202ENST00000397728 CHL1O00533 1208 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 R3HCC1Q9Y3T6 440 aaKnown RBP18.19■□□□□ 0.5
LSS-202ENST00000397728 MYOM2P54296 1465 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 CCDC96Q2M329 555 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
LSS-202ENST00000397728 RBM26Q5T8P6 1007 aaKnown RBP18.18■□□□□ 0.5
LSS-202ENST00000397728 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
LSS-202ENST00000397728 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 TRIM37O94972 964 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 FIBPO43427 364 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 TXLNAP40222 546 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
LSS-202ENST00000397728 RNF41Q9H4P4 317 aaPredicted RBP18.18■□□□□ 0.5
LSS-202ENST00000397728 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 TPM1P09493 284 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
LSS-202ENST00000397728 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
LSS-202ENST00000397728 CYP7A1P22680 504 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
LSS-202ENST00000397728 HOXB7P09629 217 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms