RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MCM2P49736 904 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 TAF7LQ5H9L4 462 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 ARID3AQ99856 593 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 AK2P54819 239 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 RIMS1Q86UR5 1692 aaKnown RBP12.55□□□□□ -0.4
CPSF1P1-201ENST00000397477 ESPNB1AK53 854 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 CYP46A1Q9Y6A2 500 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 PTH1RQ03431 593 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 ERC1Q8IUD2 1116 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 NSFL1CQ9UNZ2 370 aaKnown RBP12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
CPSF1P1-201ENST00000397477 KDM4AO75164 1064 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 ITSN1Q15811 1721 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 SGSM2O43147 1006 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
CPSF1P1-201ENST00000397477 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.4
CPSF1P1-201ENST00000397477 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 PI4K2BQ8TCG2 481 aa12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
CPSF1P1-201ENST00000397477 DDIT3P35638 169 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 ADCK5Q3MIX3 580 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 FAM173BQ6P4H8 233 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 ALDH1L1O75891 902 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 TFCP2Q12800 502 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
CPSF1P1-201ENST00000397477 A1BGP04217 495 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 GJB2P29033 226 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 STAP2Q9UGK3 403 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 CHGBP05060 677 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 EPHA10Q5JZY3 1008 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 HSPA4P34932 840 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 PKNOX2Q96KN3 472 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 ADCY9O60503 1353 aa12.5□□□□□ -0.41
CPSF1P1-201ENST00000397477 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 FBXW7Q969H0 707 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 ERBB3P21860 1342 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 UBR1Q8IWV7 1749 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 TIMM10P62072 90 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 POLA2Q14181 598 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 ZNF594Q96JF6 807 aaPredicted RBP12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 H3BQV1 296 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 GOLIM4O00461 696 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 STX6O43752 255 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 PHKG2P15735 406 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 PEAK1Q9H792 1746 aa12.49□□□□□ -0.41
CPSF1P1-201ENST00000397477 SASH1O94885 1247 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 LARGE1O95461 756 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 MBD3O95983 291 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 GPTP24298 496 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 ANAPC15P60006 121 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms