RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 ME3Q16798 604 aa21.62■■□□□ 1.05
HERPUD2-202ENST00000396081 AOX1Q06278 1338 aa21.62■■□□□ 1.05
HERPUD2-202ENST00000396081 CDC37L1Q7L3B6 337 aa21.61■■□□□ 1.05
HERPUD2-202ENST00000396081 SMTNL1A8MU46 457 aa21.61■■□□□ 1.05
HERPUD2-202ENST00000396081 SSH3Q8TE77 659 aa21.61■■□□□ 1.05
HERPUD2-202ENST00000396081 KIF1BPQ96EK5 621 aa21.61■■□□□ 1.05
HERPUD2-202ENST00000396081 EPB41L2O43491 1005 aaKnown RBP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 V9GYY5 206 aaPredicted RBP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 TMEM131LA2VDJ0 1609 aa21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 RAB11FIP3O75154 756 aa21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 EIF2S2P20042 333 aaKnown RBP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 ZSCAN31Q96LW9 406 aaPredicted RBP21.6■■□□□ 1.05
HERPUD2-202ENST00000396081 BICD2Q8TD16 824 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 DNAJC25Q9H1X3 360 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 SH2B1Q9NRF2 756 aaPredicted RBP21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 CLIP2Q9UDT6 1046 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 VPS53Q5VIR6 699 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 RUFY2Q8WXA3 655 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
HERPUD2-202ENST00000396081 ZKSCAN1P17029 563 aaPredicted RBP21.58■■□□□ 1.05
HERPUD2-202ENST00000396081 ZNF75DP51815 510 aa21.58■■□□□ 1.05
HERPUD2-202ENST00000396081 CTNNA3Q9UI47 895 aa21.58■■□□□ 1.05
HERPUD2-202ENST00000396081 ZNF165P49910 485 aa21.58■■□□□ 1.04
HERPUD2-202ENST00000396081 STK3Q13188 491 aa21.58■■□□□ 1.04
HERPUD2-202ENST00000396081 ST3GAL1Q11201 340 aa21.57■■□□□ 1.04
HERPUD2-202ENST00000396081 HDGFL1Q5TGJ6 251 aa21.57■■□□□ 1.04
HERPUD2-202ENST00000396081 CACTINQ8WUQ7 758 aaKnown RBP21.57■■□□□ 1.04
HERPUD2-202ENST00000396081 PRR36Q9H6K5 1346 aa21.57■■□□□ 1.04
HERPUD2-202ENST00000396081 TPCN1Q9ULQ1 816 aa21.57■■□□□ 1.04
HERPUD2-202ENST00000396081 NBPF7P0C2Y1 421 aaPredicted RBP21.56■■□□□ 1.04
HERPUD2-202ENST00000396081 NPHP1O15259 732 aa21.56■■□□□ 1.04
HERPUD2-202ENST00000396081 AMPHP49418 695 aa21.56■■□□□ 1.04
HERPUD2-202ENST00000396081 MLECQ14165 292 aa21.56■■□□□ 1.04
HERPUD2-202ENST00000396081 ACEP12821 1306 aa21.55■■□□□ 1.04
HERPUD2-202ENST00000396081 GLRX3O76003 335 aaKnown RBP21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 CEP135Q66GS9 1140 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 ZSWIM6Q9HCJ5 1215 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 METP08581 1390 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 CCDC144CPQ8IYA2 1237 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 PAXBP1Q9Y5B6 917 aa21.54■■□□□ 1.04
HERPUD2-202ENST00000396081 ARID5BQ14865 1188 aa21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 TRMT1Q9NXH9 659 aaKnown RBP21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 RBM8AQ9Y5S9 174 aaKnown RBP21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 GOLGA6L19H0YKK7 550 aa21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 NR1I2O75469 434 aa21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 CEBPZQ03701 1054 aaKnown RBP21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 EYA1Q99502 592 aa21.53■■□□□ 1.04
HERPUD2-202ENST00000396081 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 PDCP20941 246 aa21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 FILIP1Q7Z7B0 1213 aa21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 SCAND2PQ9GZW5 306 aaPredicted RBP21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 DDX41Q9UJV9 622 aaKnown RBP21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
HERPUD2-202ENST00000396081 BBXQ8WY36 941 aaPredicted RBP21.52■■□□□ 1.03
HERPUD2-202ENST00000396081 DDX19AQ9NUU7 478 aaKnown RBP21.52■■□□□ 1.03
HERPUD2-202ENST00000396081 IFIT2P09913 472 aaKnown RBP21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 ANXA1P04083 346 aa21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 CREB3L3Q68CJ9 461 aa21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 PLA2G4DQ86XP0 818 aa21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 LEO1Q8WVC0 666 aaPredicted RBP21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 FBXW7Q969H0 707 aa21.51■■□□□ 1.03
HERPUD2-202ENST00000396081 USP27XA6NNY8 438 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 GNAT3A8MTJ3 354 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 POLA2Q14181 598 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 ZNF215Q9UL58 517 aaPredicted RBP21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 ARHGEF10O15013 1369 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 FAM227BQ96M60 508 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 CLSTN2Q9H4D0 955 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 NPHP3Q7Z494 1330 aa21.5■■□□□ 1.03
HERPUD2-202ENST00000396081 DIP2CQ9Y2E4 1556 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 FOSBP53539 338 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 PTPN14Q15678 1187 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 TDRD7Q8NHU6 1098 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 KIF18AQ8NI77 898 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 DDX11Q96FC9 970 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 PREX1Q8TCU6 1659 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 GABPB1Q06547 395 aaPredicted RBP21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 BLOC1S2Q6QNY1 142 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 PA2G4Q9UQ80 394 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 CCDC171Q6TFL3 1326 aa21.49■■□□□ 1.03
HERPUD2-202ENST00000396081 ERICH4A6NGS2 130 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 HSP90AB4PQ58FF6 505 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 TM6SF1Q9BZW5 370 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 ECHDC1Q9NTX5 307 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 A0A087WWV3 80 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 PI4KAP2A4QPH2 592 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 ZBTB22O15209 634 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 SYCP1Q15431 976 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 PI4KAP1Q8N8J0 262 aa21.48■■□□□ 1.03
HERPUD2-202ENST00000396081 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms