RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
SFMBT1-201ENST00000394752 KRT85P78386 507 aa17.46■□□□□ 0.39
SFMBT1-201ENST00000394752 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
SFMBT1-201ENST00000394752 SLC39A6Q13433 755 aa17.46■□□□□ 0.38
SFMBT1-201ENST00000394752 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.38
SFMBT1-201ENST00000394752 MYD88Q99836 296 aa17.46■□□□□ 0.38
SFMBT1-201ENST00000394752 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 DTNBO60941 627 aa17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 CAMK4Q16566 473 aa17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 ZSCAN30Q86W11 494 aa17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
SFMBT1-201ENST00000394752 HSPA2P54652 639 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 TRIM29Q14134 588 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 SNX21Q969T3 373 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 PES1O00541 588 aaKnown RBP17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
SFMBT1-201ENST00000394752 USP31Q70CQ4 1352 aa17.43■□□□□ 0.38
SFMBT1-201ENST00000394752 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
SFMBT1-201ENST00000394752 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
SFMBT1-201ENST00000394752 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
SFMBT1-201ENST00000394752 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
SFMBT1-201ENST00000394752 CCAR2Q8N163 923 aaKnown RBP17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 TNMDQ9H2S6 317 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 KINO60870 393 aaKnown RBP17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 ESYT1Q9BSJ8 1104 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 HOXB7P09629 217 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
SFMBT1-201ENST00000394752 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 CCDC192P0DO97 292 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 EIF4A1P60842 406 aaKnown RBP17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 LIMCH1Q9UPQ0 1083 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 USP25Q9UHP3 1055 aa17.41■□□□□ 0.38
SFMBT1-201ENST00000394752 ME1P48163 572 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
SFMBT1-201ENST00000394752 ADGRB2O60241 1585 aa17.39■□□□□ 0.38
SFMBT1-201ENST00000394752 NECAB1Q8N987 351 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 A0A087WZG4 1122 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 KCNQ3O43525 872 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 ANKRD1Q15327 319 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
SFMBT1-201ENST00000394752 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 CWF19L2Q2TBE0 894 aaKnown RBP17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 ZSCAN31Q96LW9 406 aaPredicted RBP17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 GUCY1B3Q02153 619 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 STK38Q15208 465 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 TTC39AQ5SRH9 613 aa17.38■□□□□ 0.37
SFMBT1-201ENST00000394752 NUP62CLQ9H1M0 184 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 GRM8O00222 908 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 COPS6Q7L5N1 327 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 MTMR7Q9Y216 660 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 DIP2AQ14689 1571 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 CPA1P15085 419 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
SFMBT1-201ENST00000394752 STX6O43752 255 aa17.36■□□□□ 0.37
SFMBT1-201ENST00000394752 MAP2P11137 1827 aaKnown RBP17.36■□□□□ 0.37
SFMBT1-201ENST00000394752 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
SFMBT1-201ENST00000394752 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
SFMBT1-201ENST00000394752 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
SFMBT1-201ENST00000394752 GJB2P29033 226 aa17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 FILIP1Q7Z7B0 1213 aa17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 TMOD3Q9NYL9 352 aa17.35■□□□□ 0.37
SFMBT1-201ENST00000394752 UQCRHLA0A096LP55 91 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms