RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 AMPHP49418 695 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 PDILTQ8N807 584 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 COG3Q96JB2 828 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 LRRC2Q9BYS8 371 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 KRT28Q7Z3Y7 464 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 NME9Q86XW9 330 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 ATP6V1DQ9Y5K8 247 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 ROBO1Q9Y6N7 1651 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 PYCARDQ9ULZ3 195 aa10.5□□□□□ -0.73
RTN4-206ENST00000394611 AKAP12Q02952 1782 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 PES1O00541 588 aaKnown RBP10.49□□□□□ -0.73
RTN4-206ENST00000394611 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 CHMP4CQ96CF2 233 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
RTN4-206ENST00000394611 NUP62CLQ9H1M0 184 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 AAMPQ13685 434 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 USP6P35125 1406 aa10.49□□□□□ -0.73
RTN4-206ENST00000394611 SRRTQ9BXP5 876 aaKnown RBP10.49□□□□□ -0.73
RTN4-206ENST00000394611 UBTFL1P0CB47 393 aaPredicted RBP10.48□□□□□ -0.73
RTN4-206ENST00000394611 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
RTN4-206ENST00000394611 PPP1R9BQ96SB3 815 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 MX1P20591 662 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 PTPN21Q16825 1174 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 CCDC183Q5T5S1 534 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 DNAJC25Q9H1X3 360 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 CLIP2Q9UDT6 1046 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
RTN4-206ENST00000394611 C9orf78Q9NZ63 289 aaPredicted RBP10.48□□□□□ -0.73
RTN4-206ENST00000394611 KIF1AQ12756 1690 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 MON2Q7Z3U7 1717 aa10.48□□□□□ -0.73
RTN4-206ENST00000394611 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
RTN4-206ENST00000394611 GJB2P29033 226 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 PPARDQ03181 441 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 SPATA32Q96LK8 384 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 SRCIN1Q9C0H9 1055 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 NPHP3Q7Z494 1330 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 IQSEC2Q5JU85 1478 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 SRGAP3O43295 1099 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 LRRFIP2Q9Y608 721 aaKnown RBP10.47□□□□□ -0.73
RTN4-206ENST00000394611 FYB1O15117 783 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 SMAP1Q8IYB5 467 aaPredicted RBP10.47□□□□□ -0.73
RTN4-206ENST00000394611 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
RTN4-206ENST00000394611 STX6O43752 255 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 ANO6Q4KMQ2 910 aa10.47□□□□□ -0.73
RTN4-206ENST00000394611 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
RTN4-206ENST00000394611 ABTB2Q8N961 1025 aa10.46□□□□□ -0.73
RTN4-206ENST00000394611 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.73
RTN4-206ENST00000394611 GNAI2P04899 355 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 ZNF445P59923 1031 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 MAP3K11Q16584 847 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.74
RTN4-206ENST00000394611 DACT1Q9NYF0 836 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.74
RTN4-206ENST00000394611 MYRIPQ8NFW9 859 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 TOMM22Q9NS69 142 aa10.46□□□□□ -0.74
RTN4-206ENST00000394611 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.74
RTN4-206ENST00000394611 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 ME1P48163 572 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 NFE2L2Q16236 605 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 G2E3Q7L622 706 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 PXDNQ92626 1479 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 VAMP4O75379 141 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 PDE1AP54750 535 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 LMOD3Q0VAK6 560 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 NRKQ7Z2Y5 1582 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 ZNF165P49910 485 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 PTPN14Q15678 1187 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 PDRG1Q9NUG6 133 aa10.45□□□□□ -0.74
RTN4-206ENST00000394611 NLRP6P59044 892 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 KRT85P78386 507 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 TEFQ10587 303 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 KIF2CQ99661 725 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 USHBP1Q8N6Y0 703 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 PATL2C9JE40 543 aaKnown RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 CCDC73Q6ZRK6 1079 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 CCDC8Q9H0W5 538 aaPredicted RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 URI1O94763 535 aaPredicted RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 NHSL1Q5SYE7 1610 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 CABLES1Q8TDN4 633 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 TRPM3Q9HCF6 1732 aaPredicted RBP10.44□□□□□ -0.74
RTN4-206ENST00000394611 USP16Q9Y5T5 823 aa10.44□□□□□ -0.74
RTN4-206ENST00000394611 CCDC66A2RUB6 948 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 ELF2Q15723 593 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 BOLA2Q9H3K6 86 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 ST7Q9NRC1 585 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 RAB11FIP3O75154 756 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms