RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 BCL2L12Q9HB09 334 aa19.98■□□□□ 0.79
SIPA1-201ENST00000394224 EDC4Q6P2E9 1401 aaKnown RBP19.98■□□□□ 0.79
SIPA1-201ENST00000394224 KNDC1Q76NI1 1749 aa19.98■□□□□ 0.79
SIPA1-201ENST00000394224 ARID5BQ14865 1188 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 DNAJC25Q9H1X3 360 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
SIPA1-201ENST00000394224 JAK2O60674 1132 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 ZKSCAN1P17029 563 aaPredicted RBP19.97■□□□□ 0.79
SIPA1-201ENST00000394224 ANO6Q4KMQ2 910 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 ZNF710Q8N1W2 664 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 FRMPD1Q5SYB0 1578 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
SIPA1-201ENST00000394224 ISM2Q6H9L7 571 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 TPCN1Q9ULQ1 816 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 HS1BP3Q53T59 392 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 TTC6Q86TZ1 520 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 MAP3K2Q9Y2U5 619 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 RBM8AQ9Y5S9 174 aaKnown RBP19.96■□□□□ 0.79
SIPA1-201ENST00000394224 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
SIPA1-201ENST00000394224 LTKP29376 864 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 SLC39A6Q13433 755 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
SIPA1-201ENST00000394224 PDCL2Q8N4E4 241 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 PI4K2BQ8TCG2 481 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 AMOTL2Q9Y2J4 779 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 RPAP1Q9BWH6 1393 aaPredicted RBP19.95■□□□□ 0.78
SIPA1-201ENST00000394224 PTPN21Q16825 1174 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 LSG1Q9H089 658 aaKnown RBP19.95■□□□□ 0.78
SIPA1-201ENST00000394224 KCNF1Q9H3M0 494 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 OSBPL3Q9H4L5 887 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 TCHHQ07283 1943 aa19.95■□□□□ 0.78
SIPA1-201ENST00000394224 SIGLEC1Q9BZZ2 1709 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 H3BQV1 296 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 DNAAF4Q8WXU2 420 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 SPATA32Q96LK8 384 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 NUP62CLQ9H1M0 184 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 ROBO2Q9HCK4 1378 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 CCT2P78371 535 aaKnown RBP19.94■□□□□ 0.78
SIPA1-201ENST00000394224 NMIQ13287 307 aaPredicted RBP19.94■□□□□ 0.78
SIPA1-201ENST00000394224 MTMR6Q9Y217 621 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 MYRIPQ8NFW9 859 aa19.94■□□□□ 0.78
SIPA1-201ENST00000394224 INTS4Q96HW7 963 aaKnown RBP19.94■□□□□ 0.78
SIPA1-201ENST00000394224 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
SIPA1-201ENST00000394224 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
SIPA1-201ENST00000394224 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
SIPA1-201ENST00000394224 RAD50Q92878 1312 aa19.93■□□□□ 0.78
SIPA1-201ENST00000394224 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
SIPA1-201ENST00000394224 CCDC85AQ96PX6 553 aaPredicted RBP19.93■□□□□ 0.78
SIPA1-201ENST00000394224 TPD52L1Q16890 204 aaPredicted RBP19.92■□□□□ 0.78
SIPA1-201ENST00000394224 PIK3C2BO00750 1634 aa19.92■□□□□ 0.78
SIPA1-201ENST00000394224 ZNF530Q6P9A1 599 aaPredicted RBP19.91■□□□□ 0.78
SIPA1-201ENST00000394224 ATP6V1DQ9Y5K8 247 aa19.91■□□□□ 0.78
SIPA1-201ENST00000394224 ABCA9Q8IUA7 1624 aa19.91■□□□□ 0.78
SIPA1-201ENST00000394224 ALKQ9UM73 1620 aa19.91■□□□□ 0.78
SIPA1-201ENST00000394224 A0A0D9SFI3 127 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 NR1I2O75469 434 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 TYRO3Q06418 890 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 ANAPC15P60006 121 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 KRT85P78386 507 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 G3BP1Q13283 466 aaKnown RBP eCLIP19.9■□□□□ 0.78
SIPA1-201ENST00000394224 GORABQ5T7V8 394 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
SIPA1-201ENST00000394224 BLOC1S2Q6QNY1 142 aa19.89■□□□□ 0.78
SIPA1-201ENST00000394224 CREB3L3Q68CJ9 461 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 NEUROD6Q96NK8 337 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 BIN1O00499 593 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
SIPA1-201ENST00000394224 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.77
SIPA1-201ENST00000394224 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 CCDC94Q9BW85 323 aaPredicted RBP19.89■□□□□ 0.77
SIPA1-201ENST00000394224 TMX1Q9H3N1 280 aa19.89■□□□□ 0.77
SIPA1-201ENST00000394224 HSP90AA4PQ58FG1 418 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 ZNF771Q7L3S4 317 aaPredicted RBP19.88■□□□□ 0.77
SIPA1-201ENST00000394224 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
SIPA1-201ENST00000394224 FAM184AQ8NB25 1140 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 SSH3Q8TE77 659 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 ECHDC1Q9NTX5 307 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 GLRX3O76003 335 aaKnown RBP19.88■□□□□ 0.77
SIPA1-201ENST00000394224 MCM5P33992 734 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
SIPA1-201ENST00000394224 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 USP16Q9Y5T5 823 aa19.88■□□□□ 0.77
SIPA1-201ENST00000394224 SALL3Q9BXA9 1300 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 ZNF165P49910 485 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 NBPF6Q5VWK0 638 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 RUFY2Q8WXA3 655 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 NBPF4Q96M43 638 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 NCOA5Q9HCD5 579 aaKnown RBP19.87■□□□□ 0.77
SIPA1-201ENST00000394224 CRB1P82279 1406 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 TNNT1P13805 278 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 HSP90AB3PQ58FF7 597 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 CBX8Q9HC52 389 aa19.87■□□□□ 0.77
SIPA1-201ENST00000394224 MLH3Q9UHC1 1453 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms